Fig. 5

The transcriptome reprogramming is different in ILa kernel or ILb kernel during early development stage. (a) The obtained DEG numbers from different transcriptome pairs at different developing stage of ILa or ILb. a8/a5 or b8/b5 means transcriptome from ILa or ILb kernel collected at 8-DAP compared to transcriptome from ILa or ILb kernel collected at 5-DAP, and so on for a10/a5, b10/b5, a10/a8, b10/b8. (b-d) The overlapping of the DEGs between /among the transcriptome pairs from ILa (B) or ILb (c) at different developing stage or between ILa and ILb at the same stage (d). (e) 111 TF-encoding genes were detected to be differentially expressed at least in one of the three transcriptome pairs of ILa or ILbs. Multiple Hox and SBP, while no WRKY encoding genes were found to be differentially expressed in the three transcriptome pairs of ILa or ILb