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Table 4 Enrichment results of TFs associated with hormones and PCD in cluster 4 and cluster 6

From: Transcriptional regulation of Lonicera japonica Thunb. during flower development as revealed by comprehensive analysis of transcription factors

No.

Family

TF

Access

Species

E-value

Identify

FPKM

Function

S1

S2

S3

S4

S5

c4

 1

ERF

ERF028

Q9FJ93

Ath

2.2E-38

71.96

174.02

31.22

26.42

7.45

11.39

ABA-m

 2

bHLH

MYC2

Q39204

Ath

3.5E-47

72.66

116.49

27.68

18.57

5.73

10.43

ABA-m

 3

MYB

MYB44

Q9FDW1

Ath

5.4E-33

77.78

30.44

5.77

9.63

2.70

1.65

ABA-m

 4

C2H2

AZF2

Q9SSW2

Ath

1.4E-10

93.1

124.21

47.16

37.00

21.77

64.54

ABA-m

 5

bHLH

BHLH28

Q9LUK7

Ath

8.9E-27

81.43

15.93

2.22

5.37

0.03

0.36

ABA-m

 6

WRKY

331.73

40.78

75.34

6.91

98.37

ABA-m

 7

C2H2

AZF2

Q9SSW2

Ath

2.3E-08

82.76

157.64

43.24

26.69

16.78

40.29

ABA-m

 8

MYB

MYB44

Q9FDW1

Ath

1.2E-28

74.03

10.08

2.37

0.36

0.00

0.00

ABA-m

 9

MYB

MYB44

Q9FDW1

Ath

2.4E-16

78

59.04

10.26

21.91

5.89

4.06

ABA-m

 10

MYB

MYB44

Q9FDW1

Ath

1.1E-52

89.52

97.00

36.58

67.57

44.99

66.88

ABA-m

 11

ERF

ERF072

Q9M0L0

Ath

5.2E-44

75.42

155.37

9.12

11.01

0.22

0.64

ABA-m

 12

MYB

MYB44

Q9FDW1

Ath

2.4E-48

81.9

75.94

16.12

7.40

1.37

2.61

ABA-m

 13

WRKY

WRKY40

Q9SAH7

Ath

4E-29

92.19

92.23

19.30

36.11

27.31

49.44

ABA-m

 14

WRKY

WRKY70

Q9LY00

Ath

1.6E-17

62.71

51.75

18.71

35.62

40.34

33.77

ABA-m

 15

MYB

MYB44

Q9FDW1

Ath

1.1E-50

85.71

146.82

26.67

17.47

5.88

7.90

ABA-m

 16

NAC

NAC102

Q8H115

Ath

5.9E-26

90

63.31

18.15

8.28

23.77

51.21

ABA-m

 17

NAC

NAC102

Q8H115

Ath

1.6E-51

90.1

30.93

9.31

3.19

8.77

28.20

ABA-m

 18

NAC

NAC002

Q39013

Ath

1.7E-21

88.46

200.17

30.53

26.42

32.49

83.49

ABA-m

 19

NAC

NAC002

Q39013

Ath

2.3E-44

90.7

601.19

127.24

89.40

102.27

186.80

ABA-m

 20

NAC

NAC102

Q8H115

Ath

4.8E-51

90.91

104.53

27.28

22.25

28.75

76.53

ABA-m

 21

bZIP

ABF2

Q9M7Q4

Ath

8.5E-38

79

8.86

2.81

1.49

2.44

3.01

ABA-m

 22

ERF

ERF042

Q52QU1

Ath

1.5E-09

84.38

154.22

26.46

18.96

1.81

5.19

ABA-m

 23

bHLH

BHLH13

Q9LNJ5

Ath

1.1E-86

70.62

24.28

5.51

15.05

12.89

14.44

ABA-m

 24

ERF

ERF109

Q9SZ06

Ath

6.7E-25

80.88

64.11

7.22

1.88

0.32

0.81

JA-sti

 25

MYB_related

RVE1

F4KGY6

Ath

1.4E-18

86

8.80

2.50

2.97

3.56

4.58

JA-sti

 26

ERF

ERF12

Q94ID6

Ath

6.9E-29

92.06

7.44

1.08

2.68

2.84

5.08

JA-sti

 2

bHLH

MYC2

Q39204

Ath

3.5E-47

72.66

116.49

27.68

18.57

5.73

10.43

JA-sti

 3

MYB

MYB44

Q9FDW1

Ath

5.4E-33

77.78

30.44

5.77

9.63

2.70

1.65

JA-sti

 5

bHLH

BHLH28

Q9LUK7

Ath

8.9E-27

81.43

15.93

2.22

5.37

0.03

0.36

JA-sti

 10

MYB

MYB44

Q9FDW1

Ath

1.1E-52

89.52

97.00

36.58

67.57

44.99

66.88

JA-sti

 8

MYB

MYB44

Q9FDW1

Ath

1.2E-28

74.03

10.08

2.37

0.36

0.00

0.00

JA-sti

 9

MYB

MYB44

Q9FDW1

Ath

2.4E-16

78

59.04

10.26

21.91

5.89

4.06

JA-sti

 27

ERF

ERF4

Q9LW49

Nsy

2.7E-28

88.06

70.47

37.92

28.64

19.73

39.27

JA-sti

 28

MYB

ODO1

Q50EX6

Phy

4.7E-66

86.05

22.68

7.22

6.52

14.36

21.03

JA-sti

 12

MYB

MYB44

Q9FDW1

Ath

2.4E-48

81.9

75.94

16.12

7.40

1.37

2.61

JA-sti

 29

MYB

ODO1

Q50EX6

Phy

2.2E-72

95.35

10.64

1.88

0.75

0.23

2.01

JA-sti

 13

WRKY

WRKY40

Q9SAH7

Ath

4E-29

92.19

92.23

19.30

36.11

27.31

49.44

JA-sti

 14

WRKY

WRKY70

Q9LY00

Ath

1.6E-17

62.71

51.75

18.71

35.62

40.34

33.77

JA-sti

 30

C3H

AtC3H2

Q9ZWA1

Ath

6.7E-59

82.76

21.60

2.65

3.25

0.14

0.15

JA-sti

 15

MYB

MYB44

Q9FDW1

Ath

1.1E-50

85.71

146.82

26.67

17.47

5.88

7.90

JA-sti

 16

NAC

NAC102

Q8H115

Ath

5.9E-26

90

63.31

18.15

8.28

23.77

51.21

JA-sti

 17

NAC

NAC102

Q8H115

Ath

1.6E-51

90.1

30.93

9.31

3.19

8.77

28.20

JA-sti

 18

NAC

NAC002

Q39013

Ath

1.7E-21

88.46

200.17

30.53

26.42

32.49

83.49

JA-sti

 31

NAC

NAC102

Q8H115

Ath

1.3E-21

90.38

318.41

81.88

49.04

78.02

101.43

JA-sti

 19

NAC

NAC002

Q39013

Ath

2.3E-44

90.7

601.19

127.24

89.40

102.27

186.80

JA-sti

 20

NAC

NAC102

Q8H115

Ath

4.8E-51

90.91

104.53

27.28

22.25

28.75

76.53

JA-sti

 32

ERF

EREBP1

Q6K7E6

Osa

2.3E-29

86.96

109.31

19.46

24.40

63.24

80.13

JA-sti

 33

ERF

ERF4

O80340

Ath

2.7E-30

88.73

15.03

5.03

2.49

1.04

3.03

JA-sti

 34

ERF

ERF72

P42736

Ath

4E-27

88.89

41.03

22.00

35.14

13.74

33.80

JA-sti

 6

WRKY

331.73

40.78

75.34

6.91

98.37

JA-sti

 35

WRKY

WRKY54

Q93WU8

Ath

2.1E-13

77.27

144.39

27.50

27.56

10.64

17.19

JA-sti

 36

ERF

ERF109

Q9SZ06

Ath

8.9E-27

83.82

111.60

10.30

14.75

1.71

4.52

JA-sti

 37

WRKY

WRKY33

Q8S8P5

Ath

3.6E-51

87.74

5.58

1.30

0.57

0.46

2.10

JA-sti

 38

WRKY

WRKY33

Q8S8P5

Ath

3.6E-51

87.74

1.92

0.87

0.50

0.26

0.75

JA-sti

 23

bHLH

BHLH13

Q9LNJ5

Ath

1.1E-86

70.62

24.28

5.51

15.05

12.89

14.44

JA-sti

 24

ERF

ERF109

Q9SZ06

Ath

6.7E-25

80.88

64.11

7.22

1.88

0.32

0.81

SA-sti

 25

MYB_related

RVE1

F4KGY6

Ath

1.4E-18

86

8.80

2.50

2.97

3.56

4.58

SA-sti

 28

MYB

ODO1

Q50EX6

Phy

4.7E-66

86.05

22.68

7.22

6.52

14.36

21.03

SA-sti

 39

Dof

DOF1.7

O82155

Ath

8E-30

88.71

38.58

13.28

13.06

8.86

7.78

SA-sti

 3

MYB

MYB44

Q9FDW1

Ath

5.4E-33

77.78

30.44

5.77

9.63

2.70

1.65

SA-sti

 8

MYB

MYB44

Q9FDW1

Ath

1.2E-28

74.03

10.08

2.37

0.36

0.00

0.00

SA-sti

 9

MYB

MYB44

Q9FDW1

Ath

2.4E-16

78

59.04

10.26

21.91

5.89

4.06

SA-sti

 40

WRKY

WRKY53

Q9SUP6

Ath

1.3E-40

73.27

49.19

11.98

6.12

8.58

23.58

SA-sti

 12

MYB

MYB44

Q9FDW1

Ath

2.4E-48

81.9

75.94

16.12

7.40

1.37

2.61

SA-sti

 29

MYB

ODO1

Q50EX6

Phy

2.2E-72

95.35

10.64

1.88

0.75

0.23

2.01

SA-sti

 13

WRKY

WRKY40

Q9SAH7

Ath

4E-29

92.19

92.23

19.30

36.11

27.31

49.44

SA-sti

 14

WRKY

WRKY70

Q9LY00

Ath

1.6E-17

62.71

51.75

18.71

35.62

40.34

33.77

SA-sti

 41

WRKY

WRKY53

Q9SUP6

Ath

2.5E-22

69.7

54.21

10.95

8.69

7.42

16.86

SA-sti

 15

MYB

MYB44

Q9FDW1

Ath

1.1E-50

85.71

146.82

26.67

17.47

5.88

7.90

SA-sti

 16

NAC

NAC102

Q8H115

Ath

5.9E-26

90

63.31

18.15

8.28

23.77

51.21

SA-sti

 17

NAC

NAC102

Q8H115

Ath

1.6E-51

90.1

30.93

9.31

3.19

8.77

28.20

SA-sti

 18

NAC

NAC002

Q39013

Ath

1.7E-21

88.46

200.17

30.53

26.42

32.49

83.49

SA-sti

 31

NAC

NAC102

Q8H115

Ath

1.3E-21

90.38

318.41

81.88

49.04

78.02

101.43

SA-sti

 19

NAC

NAC002

Q39013

Ath

2.3E-44

90.7

601.19

127.24

89.40

102.27

186.80

SA-sti

 20

NAC

NAC102

Q8H115

Ath

4.8E-51

90.91

104.53

27.28

22.25

28.75

76.53

SA-sti

 6

WRKY

331.73

40.78

75.34

6.91

98.37

SA-sti

 35

WRKY

WRKY54

Q93WU8

Ath

2.1E-13

77.27

144.39

27.50

27.56

10.64

17.19

SA-sti

 36

ERF

ERF109

Q9SZ06

Ath

8.9E-27

83.82

111.60

10.30

14.75

1.71

4.52

SA-sti

 37

WRKY

WRKY33

Q8S8P5

Ath

3.6E-51

87.74

5.58

1.30

0.57

0.46

2.10

SA-sti

 38

WRKY

WRKY33

Q8S8P5

Ath

3.6E-51

87.74

1.92

0.87

0.50

0.26

0.75

SA-sti

 10

MYB

MYB44

Q9FDW1

Ath

1.1E-52

89.52

97.00

36.58

67.57

44.99

66.88

SA-sti

 40

WRKY

WRKY53

Q9SUP6

Ath

1.3E-40

73.27

49.19

11.98

6.12

8.58

23.58

ROS

 42

NAC

NAC053

Q949N0

Ath

5.9E-09

75.76

37.83

16.34

19.75

19.77

21.22

ROS

 43

HSF

HSFB2B

Q9T0D3

Ath

3.2E-50

90

103.40

30.71

27.61

38.43

58.95

ROS

 44

ERF

DREB2A

O82132

Ath

1.9E-37

85.71

36.79

13.78

14.76

11.20

12.52

ROS

 45

ERF

ERF105

Q8VY90

Ath

1.3E-27

83.33

3.18

0.14

0.00

0.00

3.52

ROS

 46

HSF

HSF30

P41152

Spe

5.8E-75

80.62

120.47

52.36

22.89

65.28

53.76

ROS

 47

HSF

HSF21

O49403

Ath

5.4E-50

83.18

13.34

7.87

6.71

5.42

9.58

ROS

 41

WRKY

WRKY53

Q9SUP6

Ath

2.5E-22

69.7

54.21

10.95

8.69

7.42

16.86

ROS

 48

NAC

NAC016

A4FVP6

Ath

1.3E-21

60.27

22.51

9.29

14.82

16.99

15.15

ROS

 49

NAC

NAC016

A4FVP6

Ath

9.2E-84

77.9

30.53

12.92

21.63

20.84

25.27

ROS

 35

WRKY

WRKY54

Q93WU8

Ath

2.1E-13

77.27

144.39

27.50

27.56

10.64

17.19

ROS

 50

HSF

HSFA2

O80982

Ath

2.4E-31

81.08

115.81

4.64

2.15

4.65

4.53

ROS

c6

 51

NAC

NAC019

Q9C932

Ath

3.6E-85

85.12

4.36

1.69

30.85

114.22

142.70

JA-m

 52

NAC

NAC019

Q9C932

Ath

3.6E-85

85.12

1.55

0.00

0.03

0.23

22.32

JA-m

 53

MYB

MYB108

Q9LDE1

Ath

5.8E-75

85.43

0.32

0.10

0.34

36.28

187.49

JA-m

 54

ERF

ERF1B

Q8LDC8

Ath

3.4E-41

78.22

3.46

0.08

0.69

16.55

44.22

JA-m

 55

ERF

ERF1B

Q8LDC8

Ath

1.3E-38

80

1.44

0.00

0.11

2.25

10.34

JA-m

 56

ERF

ERF4

Q40477

Nta

3.5E-30

96.88

70.54

33.95

65.84

68.46

120.33

JA-m

 57

NAC

NAC019

Q9C932

Ath

1.2E-85

85.71

37.31

5.38

17.62

150.39

288.55

JA-m

 58

NAC

NAC029

O49255

Ath

5.9E-43

85.11

2.90

2.62

17.95

62.24

119.67

JA-m

 59

MYB

MYB305

P81391

Ama

2E-45

76.47

0.93

0.35

1.68

3.47

35.34

JA-m

 60

ERF

PTI5

O04681

Sly

1E-27

90.91

2.90

4.55

5.68

3.55

19.16

JA-m

 61

HB-other

OCP3

Q8H0V5

Ath

2.6E-26

76

1.69

1.53

1.67

4.32

10.16

JA-m

 62

HB-other

OCP3

Q8H0V5

Ath

2.6E-26

76

2.16

2.69

2.90

7.83

13.35

JA-m

 63

ERF

ERF3

Q9SXS8

Nta

6.2E-32

86.08

43.94

44.21

57.46

94.23

125.35

JA-m

 64

MYB

MYB108

Q9LDE1

Ath

4.2E-52

70.54

0.00

0.08

0.49

7.82

35.21

JA-m

 65

NAC

NAC019

Q9C932

Ath

1.7E-06

95.65

1.70

0.12

2.06

9.84

16.33

JA-m

 66

WRKY

WRKY51

Q93WU9

Ath

1.8E-29

67.47

1.08

0.55

2.17

4.61

12.15

JA-m

 67

MIKC_MADS

MADS25

Q84NC5

Osa

3.5E-11

64.15

2.17

1.92

2.31

9.26

17.84

JA-m

 68

C2H2

IDD1

Q9LVQ7

Ath

1.7E-93

94.48

14.36

13.96

19.01

24.23

31.01

JA-m

 69

C3H

AtC3H20

O82199

Ath

5.8E-58

78.07

9.20

2.60

11.27

11.99

35.91

JA-m

 70

NAC

NAC019

Q9C932

Ath

1.7E-06

95.65

0.50

0.00

3.42

5.85

10.84

JA-m

 71

MIKC_MADS

J

Q9FUY6

Sly

1.7E-76

84.66

15.08

5.34

1.89

65.59

152.35

JA-m

 72

NAC

NAC48

Q7F2L3

Osa

1.3E-36

85

8.37

3.97

0.27

6.78

28.98

r-ABA-m

 73

ERF

ERF110

Q70II3

Ath

1.2E-32

92.65

0.58

0.81

3.43

5.82

14.80

r-ABA-m

 74

HD-ZIP

ATHB-5

P46667

Ath

9.9E-41

78

92.18

30.07

38.30

136.87

204.33

r-ABA-m

 61

HB-other

OCP3

Q8H0V5

Ath

2.6E-26

76

1.69

1.53

1.67

4.32

10.16

r-ABA-m

 62

HB-other

OCP3

Q8H0V5

Ath

2.6E-26

76

2.16

2.69

2.90

7.83

13.35

r-ABA-m

 65

NAC

NAC019

Q9C932

Ath

1.7E-06

95.65

1.70

0.12

2.06

9.84

16.33

r-ABA-m

 70

NAC

NAC019

Q9C932

Ath

1.7E-06

95.65

0.50

0.00

3.42

5.85

10.84

r-ABA-m

 75

ERF

ERF110

Q70II3

Ath

1E-27

80.88

0.46

0.13

0.28

2.07

15.42

r-ABA-m

 76

NAC

NAC002

Q39013

Ath

1.2E-85

92.31

17.10

2.01

32.10

296.37

442.02

r-ABA-m

 77

ERF

ERF110

Q70II3

Ath

1.9E-35

88.31

0.00

0.14

0.74

1.74

2.45

r-ABA-m

 51

NAC

NAC019

Q9C932

Ath

3.6E-85

85.12

4.36

1.69

30.85

114.22

142.70

PCD

 52

NAC

NAC019

Q9C932

Ath

3.6E-85

85.12

1.55

0.00

0.03

0.23

22.32

PCD

 71

MIKC_MADS

J

Q9FUY6

Sly

1.7E-76

84.66

15.08

5.34

1.89

65.59

152.35

PCD

 78

NAC

NAC100

Q9FLJ2

Ath

4.6E-45

82.47

15.08

5.34

1.89

65.59

152.35

PCD

 79

bZIP

TGA3

Q39234

Ath

2.4E-48

66.67

3.14

1.76

3.33

14.19

23.11

PCD

 80

LSD

LSD1

P94077

Ath

1.1E-35

72.04

1.33

0.92

0.55

6.04

22.95

PCD

 67

MIKC_MADS

MADS25

Q84NC5

Osa

3.5E-11

64.15

2.17

1.92

2.31

9.26

17.84

PCD

 81

NAC

NAC100

Q9FLJ2

Ath

1.4E-71

79.87

2.17

1.92

2.31

9.26

17.84

PCD

 82

LSD

LSD1

P94077

Ath

7.5E-39

68.93

6.17

8.43

13.47

41.89

55.71

PCD

 83

LSD

LSD1

P94077

Ath

1.1E-35

72.04

1.18

1.67

2.11

2.02

3.68

PCD

 84

NAC

NAC100

Q9FLJ2

Ath

4.2E-88

81.46

4.23

5.69

9.40

8.64

19.69

PCD

 85

bZIP

CPRF2

Q99090

Pcr

1.3E-38

86.96

5.98

4.71

9.10

14.13

20.20

PCD

 86

bZIP

TGA4

Q39162

Ath

1.2E-47

67.91

25.15

22.56

32.93

38.52

49.17

PCD

 87

bZIP

TGA21

O24160

Nta

2E-138

81.25

3.97

5.36

6.18

12.28

14.62

PCD

 88

LSD

LSD1

P94077

Ath

1.1E-35

72.04

19.46

17.22

26.41

36.47

45.97

PCD

 68

C2H2

IDD1

Q9LVQ7

Ath

1.7E-93

94.48

14.36

13.96

19.01

24.23

31.01

PCD

 89

TALE

BLH1

Q9SJ56

Ath

3.2E-52

94.29

14.36

13.96

19.01

24.23

31.01

PCD

 90

NAC

NAC100

Q9FLJ2

Ath

2.6E-79

79.88

17.04

10.57

32.60

62.18

82.40

PCD

  1. “-” means no corresponding annotation in Swiss-Prot database. Abbreviation: Ath Arabidopsis thaliana, Nsy Nicotiana sylvestris, Phy Petunia hybrid, Osa Oryza sativa subsp. japonica, Spe Solanum peruvianum, Nta Nicotiana tabacum, Ama Antirrhinum majus, Sly Solanum lycopersicum, Pcr Petroselinum crispum, ABA-m ABA mediated signaling pathway, SA-sti response to SA stimulus, JA-sti response to JA stimulus, JA-m JA mediated signaling pathway, r-ABA-m regulation of ABA mediated signaling pathway