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Fig. 5 | BMC Plant Biology

Fig. 5

From: Using RNA-seq to characterize responses to 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor herbicide resistance in waterhemp (Amaranthus tuberculatus)

Fig. 5

Characterization of mesotrione responsive differentially expressed transcripts (DETs) using gene ontology (GO) overrepresentation. A Fisher’s Exact Test [44] with a Bonferroni correction [45] was used to identify significantly (P < 0.05) overrepresented gene ontology biological process terms associated with genotype-specific DETs at a given time point or across time, relative to all transcripts in the waterhemp v4 transcriptome (Additional file 6). For each GO term, all significant time points are indicated in parentheses. To aid in data visualization, GO terms with DETs that perfectly overlapped with a larger, significant GO term were removed. In addition, only GO terms with at least 10 DETs in either the resistant or susceptible genotype are shown. Data is divided to demonstrate significant GO processes unique or common to resistant and susceptible genotypes

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BMC Plant Biology

ISSN: 1471-2229

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