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Fig. 2 | BMC Plant Biology

Fig. 2

From: Using RNA-seq to characterize responses to 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor herbicide resistance in waterhemp (Amaranthus tuberculatus)

Fig. 2

Comparing the breadth of the waterhemp v4 transcriptome to genomes of related species. Gene ontology biological process (GOBP) slim terms were used to compare the breadth of the waterhemp v4 transcriptome relative to predicted proteins from the Populus trichocarpa, Carica papaya, Asparagus officinalis, Beta vulgaris, Amaranthus hypochondriacus, and Arabidopsis thaliana genomes. The percentage of annotations associated with each GOBP slim term is consistent across all seven species, confirming the waterhemp v4 transcriptome is a suitable proxy to use in the absence of a genome sequence

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