Table 3 Articles, crops, number of samples, tissue and sample description (control vs treatment) included in the analysis
Articles | Crops | No. of Samples | Tissue | Sample Description | Duration of stress | |
|---|---|---|---|---|---|---|
Control | Treated | |||||
Clauw et al. (2015) | Arabidopsis thaliana | 6 | Seedling leaves | Control1 (ERR754071) Control2 (ERR754083) Control3 (ERR754090) | Treated1 (ERR754061) Treated1 (ERR754065) Treated3 (ERR754082) | The third seedling leaves were harvested at 10 DAS (Days after stress) |
Song et al. (2016) | Zea mays cv. B73 (Study1) | 2 | Mature leaves | Control (SRR4054956) | Treated (SRR4048280) | Leaves were collected after 15 DAS |
Corso et al. (2015) | Vitis vinifera cv. M4 | 4 | Young leaves | Control1 (SAMN02393571) Control2 (SAMN02393572) | Treated1 (SAMN02393596) Treated2 (SAMN02393595) | Leaves were collected after 10 DAS |
Li et al. (2017) | Zea Mays cv. B73 (Study 2) | 4 | Mature leaves | Control1 (SRR3984708)Control2 (SRR3984749) | Drought1 (SRR3984782) Drought2 (SRR3984791) | Plant were grown without watering until their third leaves were fully expanded |
Pieczynski et al. (2018) | Solanum tuberosum cv. Gwiazda | 10 | Mature leaves | Gwiazda_D0_1 (SRR5448182)Gwiazda_D0_2 (SRR5448183) Gwiazda_D0_3 (SRR5448184) | Gwiazda_D6_1 (SRR5448185) Gwiazda_D6_2 (SRR5448186) Gwiazda_D6_3 (SRR5448187) Gwiazda_D10_1 (SRR5448188) Gwiazda_D10_2 (SRR5448189, SRR5448190) Gwiazda_D10_3 (SRR5448191) | Leaves were collected after 6 DAS and 10 DAS |
Orcheski et al. (2016) | Malus X domestica | 4 | Seedling leaves | WR1 (SRR3160181) WR2 (SRR3160208) | PR1 (SRR3160081) PR2 (SRR3160180) | Seedling leaves were harvested after 14 days |
Liu et al. (2017) | Solanum lycopersicum cv. M82 | 4 | Seedling leaves | SCK (SRR5282480) TCK (SRR5282476) | SD (SRR5282481) TD (SRR5282478) | The third seedling leaves were harvested at 10 DAS (Days after stress) |
Salman et al. (2016) | Vitis vinifera cv. Summer Black | 2 | Mature leaves | Control (SRR3466603) | Treated (SRR3466604) | Mature leaves were collected with the interval of 5 days from 0 to 20 days |
Liu et al. (2015) | Triticum aestivum cv. TAM107 | 6 | Mature leaves | Control1 (SRR1542404) Control2 (SRR1542405) | Treated1 (SRR1542406) Treated2 (SRR1542407) Treated3 (SRR1542408) Treated 4 (SRR1542409) | Leaves were collected at 6 h after stress |