Table 1 Summary of the sequence analyses
Sample | Raw Data | Clean Data | Clean Bases | Error(%) | Q30(%) | Q20(%) | GC(%) |
|---|---|---|---|---|---|---|---|
C_1 | 52,686,688 | 51,228,474 | 7.68G | 0.03 | 93.76 | 97.82 | 47.42 |
C_5 | 53,814,950 | 52,655,664 | 7.9G | 0.03 | 93.55 | 97.74 | 47.40 |
C_9 | 52,368,624 | 50,631,012 | 7.59G | 0.03 | 93.69 | 97.79 | 47.07 |
T_1 | 52,167,050 | 50,839,792 | 7.63G | 0.03 | 93.64 | 97.8 | 47.02 |
T_5 | 52,710,758 | 51,367,402 | 7.71G | 0.03 | 93.59 | 97.74 | 46.91 |
T_9 | 52,539,880 | 51,362,884 | 7.7G | 0.03 | 93.81 | 97.84 | 46.82 |
Summary | 316,287,950 | 308,085,228 | 46.21G | Â | Â | Â | Â |