Table 5 Single nucleotide polymorphism (SNP) markers (other than Fhb1, Fhb2, and Fhb5) associated (P < 0.05) with Fusarium head blight index (FLD_IND), severity (FLD_SEV), incidence (FLD_INC), deoxynivalenol accumulation (FLD_DON), and area under disease progress curve from greenhouse evaluation (GH_AUDPC) in CDC Alsask near-isogenic lines. The numbers not in parentheses represent differences (in units for the traits) in LSmeans and the number in parentheses indicate percent disease reduction relative to susceptible allele

 1DS (BB)

10.39–26.18

–

3.2 (7.2)

6.9 (23.4)

–

3.6 (23.2)

–

2.0 (5.6)

105.1 (15.9)

 6AS (BB)

3.35

5.3 (8.0)

3.8 (11.2)

4.0 (13.6)

7.8 (15.7)

–

–

3.3 (9.1)

–

 Qfhb.ndwp-6A^b (BB)

602.5–611. 8

–

–

3.7 (11.8)

3.0 (17.2)

–

–

–

 7BS (AA)

170.52

4.3 (6.4)

3.5 (11.6)

–

9.1 (17.2)

–

3.2 (12.2)

3.5 (9.3)

68.9 (10.0)

–

 1DS (BB)

10.39–26.18

–

2.9 (6.7)

7.9 (17.6)

2.4 (3.7)

5.7 (23.3)

–

3.2 (6.7)

–

 6AS (BB)

3.35

–

9.3 (20.1)

–

4.4 (6.8)

–

–

–

–

 Qfhb.ndwp-6A (BB)

602.5–611. 8

–

–

9.4 (18.3)

–

–

3.3 (12.5)

–

–

 7BS (AA)

170.52

–

4.9 (10.5)

–

4.9 (7.3)

–

2.8 (8.4)

2.6 (5.4)

–

 1DS (BB)

10.39–26.18

–

3.8 (5.0)

3.5 (5.5)

–

–

–

–

–

 6AS (BB)

3.35

5.2 (6.1)

–

8.3 (12.6)

7.7 (10.2)

–

–

–

–

 Qfhb.ndwp-6A (BB)

602.5–611. 8

–

5.9 (7.4)

–

–

–

–

–

–

 7BS (AA)

170.52

4.1 (4.7)

–

7.9 (11.6)

8.8 (11.2)

–

–

–

–

 1DS (BB)

10.39–26.18

12.8 (23.8)

9.8 (24.3)

5.1 (23.6)

2.6 (9.9)

–

1.3 (26.0)

4.5 (18.1)

–

 6AS (BB)

3.35

–

5.5 (13.7)

–

3.7 (13.7)

–

–

–

–

 Qfhb.ndwp-6A (BB)

602.5–611. 8

10.4 (17.3)

11.4 (23.8)

2.3 (10.1)

–

–

1.4 (37.8)

–

 7BS (AA)

170.52

–

4.2 (10.1)

3.4 (14.8)

2.8 (10.1)

–

–

–

–