Table 2 Details of LD Decay distance observed at R2 < 0.2 on different chromosomes and the entire genome in Camelina sativa
Chromosome | Size (Mb) | Mean r2 | LD decay distance (Kb) at r2 < 0.2 | Count |
|---|---|---|---|---|
1 | 22.86 | 0.06 | 2462.534 | 3506 |
2 | 27.50 | 0.06 | 3094.724 | 2885 |
3 | 28.19 | 0.08 | 2152.146 | 3974 |
4 | 29.72 | 0.07 | 2773.029 | 4081 |
5 | 34.76 | 0.05 | 2914.815 | 5176 |
6 | 26.00 | 0.06 | 2766.698 | 2922 |
7 | 33.05 | 0.06 | 2401.861 | 6601 |
8 | 27.63 | 0.06 | 2068.315 | 6793 |
9 | 37.52 | 0.04 | 2401.333 | 4918 |
10 | 25.04 | 0.07 | 3885.220 | 1672 |
11 | 49.58 | 0.07 | 3038.294 | 8268 |
12 | 32.05 | 0.13 | 3364.167 | 5533 |
13 | 23.49 | 0.08 | 1736.596 | 4044 |
14 | 31.47 | 0.05 | 2383.700 | 6093 |
15 | 29.96 | 0.06 | 2179.102 | 4503 |
16 | 28.91 | 0.08 | 2193.280 | 6621 |
17 | 34.94 | 0.09 | 2693.883 | 4034 |
18 | 20.62 | 0.07 | 3599.897 | 2294 |
19 | 25.84 | 0.10 | 1793.181 | 5132 |
20 | 29.83 | 0.05 | 1927.620 | 5473 |
Whole genome | 598.96 | 0.07 | 2510.551 | 102,614 |
Average | 29.95 | 0.07 | 2591.520 | 4726 |