Table 6 Sequences and SNP variance of the nearest markers of every QTL
QTL | Nearest marker | Variants | Sequences/primer sequences |
|---|---|---|---|
qyield-1 | TP108492 | G/T | AATTCTGCAGGAAATCCCTGGGTTTTTAGGAACTCGTGGCTGATTGTGAAGCCTTGAGAGACGA |
qyield-2 | TP5959 | A/T | AATTCAAATCAATCAAAGCAAAGATGTAGTATATGTTCACCAAACAAAATACACAAAGGAGCTT |
qyield-3 | TP114819 | A/G | AATTCTTATATGATGTAAATAATGAGGAATTGAAATTGAGGGTGTTTTTATGGAAATATAATTA |
qyield-4 | TP13297 | A/G | AATTCAAGGTTACAGTCAATTGTAGAAGCCAAAAGCTACAAATTCTAGCTTCAAGTAAAATCAA |
qyield-5 | TP66709 | A/C | AATTCCTCGTAGTCGCTACATTAAATCCTCTCTATGGTCTGGCATTAAGGATCATATGAATATG |
qheight-1 | TP50650 | A/C | AATTCCAACATGCATAAATACTCAAAAACAGCAAAGTACAAAAAAAATAAAGGGACAATCAAGT |
qheight-2 | TP67747 | A/T | AATTCCTGGAAATATGTCCCCACCAACTAAGAGCAAAGGAAAAGAAAATTAAGGCAAAACATCA |
qheight-3 | TP1272 | A/T | AATTCAAAACTTTGGTTAAATTGCTAAGTGGTCCCTAAGCATCCACATGCTATGTATTGGATTA |
qheight-4 | TP17342 | G/T | AATTCAATGTATATGAATATTGTATCTTCGCATTAAAATGATATCCATGCATTGGAACAGCGAC |
qheight-5 | TP96863 | A/T | AATTCTATAGACAAATTAGTTTAAATTCAAAATACATGACGAGATTTGTTTCATATGTGTTAGT |
qdiameter-1 | TP63479 | C/T | AATTCCGTAATGGCGTCAAGTAACCCTTCGCTTCGCCCTGAGATCGGACCCGACGGTCTTGCCA |
qdiameter-2 | TP10147 | A/G | AATTCTCATTATTGCCAATATCCTTCCACTGTAGCCGCCAATTTTTGTATTTTTTTTTTTTAAT |
qdiameter-3 | TP119289 | A/G | AATTCTTGAGTTGGAGAAGCACACCATAATTTCTATATATTTATGTTGCACACCACAATTGAAG |
qdiameter-4 | SSR16 | – | (forward) CACCACTATCTCTTCCCTCACC/ (reverse) TGTTGGTAATGTTCAAGCTCCA |
qdiameter-5 | TP49959 | A/C | AATTCCAAAGCTTTGGGGAGGCTAAGGTCAGCATGTGAGAAAGCAAAGAGGTTACCTTCTTCAA |
qdiameter-6 | TP96863 | A/T | AATTCTATAGACAAATTAGTTTAAATTCAAAATACATGACGAGATTTGTTTCATATGTGTTAGT |
qbranch-1 | TP91672 | G/T | AATTCTAATAATACTTAGACTTTCTTTTGCAAAAGGACTAAATCAACCTCACACTTTCACAATC |
qbranch-2 | TP108492 | G/T | AATTCTGCAGGAAATCCCTGGGTTTTTAGGAACTCGTGGCTGATTGTGAAGCCTTGAGAGACGA |
qbranch-3 | TP105857 | C/T | AATTCTCTTGAAGAGGGAGAGTATGATGTGATCCTAAAATTCTATTTCTTGACAAGAATAATAA |
qbranch-4 | TP106467 | A/T | AATTCTGAAACACCATGGCCTGGAGACGATAGAGCTTGCACTAGAGTAGAAGAGTCGGTCTCGA |
qbranch-5 | TP110657 | A/T | AATTCTGGGTTTGCAATAATAATGAAAAAGAAGATTAAAGTAACAAAGAAAGAACCTTGTCCAT |