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Table 1 Repetitive DNA percentage composition by RepeatExplorer analyses of four Avena species genomes

From: The repetitive DNA landscape in Avena (Poaceae): chromosome and genome evolution defined by major repeat classes in whole-genome sequence reads

Species

Number of clusters representing > 0.01% of genome

Genome percentage in > 0.01% clusters

Genome % in top 15 clusters

Number of clusters > 1% of genome

% of genome annotated as Gypsy

Copia

LINEs non-LTR retroelements

DNA trans-posons

EnSpm

GC% of > 0.01% clusters

A. sativa

214

71.0%

17.8%

12

43.1%

16.0%

0.32%

5.5%

4.0%

44.0%

A. brevis

214

71.6%

19.5%

16

42.8%

15.9%

0.32%

5.4%

4.0%

43.3%

A. hirtula

198

72.5%

21.2%

14

40.5%

17.3%

0.45%

5.9%

5.0%

44.2%

A. strigosa

195

71.6%

23.7%

18

40.8%

17.4%

0.42%

5.9%

5.2%

44.0%