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Table 4 Summary of genetic diversity of 244 wheat accessions on sub-genomes and chromosomes

From: Genome-wide association study of resistance to stripe rust (Puccinia striiformis f. sp. tritici) in Sichuan wheat

Chr.a No. of markers Map length (Mb) No. of markers per Mb Major Allele Frequency Gene Diversity PICb
1A 2183 593.28 3.7 0.706 0.385 0.305
2A 2547 780.76 3.3 0.712 0.391 0.311
3A 2003 750.63 2.7 0.706 0.383 0.303
4A 2174 743.32 2.9 0.778 0.316 0.259
5A 2260 709.22 3.2 0.684 0.404 0.317
6A 2456 617.99 4.0 0.745 0.343 0.276
7A 2403 735.46 3.3 0.687 0.401 0.316
Sub-genome A 16,026 4930.66 3.3 0.717 0.375 0.298
1B 2418 688.70 3.5 0.670 0.419 0.327
2B 2376 801.23 3.0 0.714 0.379 0.302
3B 2411 829.73 2.9 0.703 0.384 0.304
4B 2401 673.47 3.6 0.725 0.371 0.296
5B 2429 712.40 3.4 0.665 0.422 0.329
6B 2436 720.96 3.4 0.696 0.395 0.312
7B 2299 750.55 3.1 0.688 0.401 0.315
Sub-genome B 16,770 5177.04 3.3 0.695 0.396 0.312
1D 1815 495.23 3.7 0.685 0.406 0.318
2D 1926 651.04 3.0 0.743 0.354 0.284
3D 1545 615.49 2.5 0.713 0.377 0.300
4D 944 509.27 1.9 0.757 0.329 0.266
5D 1539 564.75 2.7 0.700 0.386 0.304
6D 1528 473.52 3.2 0.741 0.350 0.281
7D 1966 638.46 3.1 0.696 0.382 0.300
Sub-genome D 11,263 3947.75 2.9 0.719 0.369 0.293
  1. achromosome
  2. bpolymorphism information content index