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Table 4 Summary of genetic diversity of 244 wheat accessions on sub-genomes and chromosomes

From: Genome-wide association study of resistance to stripe rust (Puccinia striiformis f. sp. tritici) in Sichuan wheat

Chr.a

No. of markers

Map length (Mb)

No. of markers per Mb

Major Allele Frequency

Gene Diversity

PICb

1A

2183

593.28

3.7

0.706

0.385

0.305

2A

2547

780.76

3.3

0.712

0.391

0.311

3A

2003

750.63

2.7

0.706

0.383

0.303

4A

2174

743.32

2.9

0.778

0.316

0.259

5A

2260

709.22

3.2

0.684

0.404

0.317

6A

2456

617.99

4.0

0.745

0.343

0.276

7A

2403

735.46

3.3

0.687

0.401

0.316

Sub-genome A

16,026

4930.66

3.3

0.717

0.375

0.298

1B

2418

688.70

3.5

0.670

0.419

0.327

2B

2376

801.23

3.0

0.714

0.379

0.302

3B

2411

829.73

2.9

0.703

0.384

0.304

4B

2401

673.47

3.6

0.725

0.371

0.296

5B

2429

712.40

3.4

0.665

0.422

0.329

6B

2436

720.96

3.4

0.696

0.395

0.312

7B

2299

750.55

3.1

0.688

0.401

0.315

Sub-genome B

16,770

5177.04

3.3

0.695

0.396

0.312

1D

1815

495.23

3.7

0.685

0.406

0.318

2D

1926

651.04

3.0

0.743

0.354

0.284

3D

1545

615.49

2.5

0.713

0.377

0.300

4D

944

509.27

1.9

0.757

0.329

0.266

5D

1539

564.75

2.7

0.700

0.386

0.304

6D

1528

473.52

3.2

0.741

0.350

0.281

7D

1966

638.46

3.1

0.696

0.382

0.300

Sub-genome D

11,263

3947.75

2.9

0.719

0.369

0.293

  1. achromosome
  2. bpolymorphism information content index