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Table 2 Basic characteristics of pepper linkage groups

From: High-density genetic map construction and QTL mapping of first flower node in pepper (Capsicum annuum L.)

LGID

Total marker

Total distance (cM)

Average distance (cM)

Max gap (cM)

Gap < 5 cM

SNP number

Trv/Tri

LG01

226

102.06

0.45

5.67

98.67%

438

120/318

LG02

347

184.37

0.53

15.90

96.82%

692

202/490

LG03

861

198.61

0.23

2.90

97.33%

1941

624/1317

LG04

455

190.08

0.42

5.75

98.46%

912

284/628

LG05

321

177.12

0.55

10.66

98.75%

709

223/486

LG06

1530

198.78

0.13

6.63

99.54%

2987

949/2038

LG07

641

166.34

0.26

14.38

99.53%

1411

437/974

LG08

122

97.23

0.80

10.07

99.17%

266

86/180

LG09

1381

197.87

0.14

7.68

99.49%

3699

1209/2490

LG10

632

181.35

0.29

20.56

98.57%

1411

419/992

LG11

1792

150.69

0.08

5.75

99.94%

4307

1333/2974

LG12

1020

165.19

0.16

4.80

99.41%

2002

645/1357

Total

9328

2009.69

0.22

20.56

98.81%

20,775

6531/14,244

  1. LG Linkage group, cM centimorgan, SNP Single nucleotide polymorphism, Trv/Tri Transversion/transition, Gap < 5 cM The average gap between adjacent markers with a value less than 5 cM