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Table 4 Significant associations between SNPs of HvXYN1 and EA activity and TAX content of barley

From: Genetic variation of HvXYN1 associated with endoxylanase activity and TAX content in barley (Hordeum vulgare L.)

Trait Marker Position F P R2 nucleotide amino acid
EA 1504 Exon 20.885 8.29E-06 ** 0.099 C/G G
EA 1417 Exon 18.675 2.39E-05** 0.088 A/G V
EA 1045 Exon 16.908 5.62E-05** 0.080 C/T N
EA 1597 Exon 13.454 3.09E-04** 0.063 A/G A
EA 110 Intron 12.278 5.60E-04** 0.058 G/C
EA 305 Exon 12.278 5.60E-04** 0.058 G/A P
EA 1880 Exon 7.374 8.03E-04** 0.070 G/− V/L
TAX 110 Intron 13.750 2.68E-04** 0.065 G/C
TAX 305 Exon 13.750 2.68E-04** 0.065 G/A P
TAX 1045 Exon 11.457 8.50E-04** 0.055 C/T N
  1. Note: The ‘Marker’ representing the nucleotide acid position in the genomic sequences of HvXYN1. R2 is the fraction of the total variation explained by the marker. * Indicates SNP significantly (P < 0.0001) associated with traits. ** Indicates SNP highly significantly (P < 0.00001) associated with traits