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Table 4 The top 50 GO terms being downregulated by TBM

From: How exposure to ALS-inhibiting gametocide tribenuron-methyl induces male sterility in rapeseed

GO Id

GO_term

S gene number

B gene number

P value of Fisher’s Exact Test

GO:0008289

Lipid binding

32

384

0

GO:0006869

Lipid transport

27

388

0

GO:0009505

Plant-type cell wall

28

655

3.87E-14

GO:0009715

Chalcone biosynthetic process

7

16

8.68E-12

GO:0009629

Response to gravity

7

16

8.68E-12

GO:0016210

Naringenin-chalcone synthase activity

7

16

8.68E-12

GO:0016298

Lipase activity

10

63

2.37E-11

GO:0031540

Regulation of anthocyanin biosynthetic process

7

24

2.50E-10

GO:0043169

Cation binding

13

192

1.34E-09

GO:0016788

Hydrolase activity, acting on ester bonds

12

181

7.36E-09

GO:0009813

Flavonoid biosynthetic process

8

58

7.79E-09

GO:0016747

Transferase activity, transferring acyl groups other than amino-acyl groups

11

166

3.15E-08

GO:0016746

Transferase activity, transferring acyl groups

9

107

7.41E-08

GO:0006629

Lipid metabolic process

13

278

1.09E-07

GO:0019953

Sexual reproduction

6

39

3.12E-07

GO:0080088

Spermidine hydroxycinnamate conjugate biosynthetic process

3

3

3.46E-07

GO:0080074

Spermidine:caffeoyl COA N-acyltransferase activity

3

3

3.46E-07

GO:0016410

N-acyltransferase activity

3

3

3.46E-07

GO:0080075

Spermidine:feruloyl COA N-acyltransferase activity

3

3

3.46E-07

GO:0080073

Spermidine:coumaroyl COA N-acyltransferase activity

3

3

3.46E-07

GO:0019915

Lipid storage

6

48

1.11E-06

GO:0080072

Spermidine:sinapoyl COA N-acyltransferase activity

3

4

1.38E-06

GO:0050734

Hydroxycinnamoyl transferase activity

3

4

1.38E-06

GO:0009859

Pollen hydration

4

13

1.64E-06

GO:0004869

Cysteine-type endopeptidase inhibitor activity

5

33

3.39E-06

GO:0009926

Auxin polar transport

7

90

3.63E-06

GO:0010584

Pollen exine formation

6

60

4.22E-06

GO:0004553

Hydrolase activity, hydrolyzing O-glycosyl compounds

13

392

5.09E-06

GO:0010224

Response to UV-B

7

101

7.83E-06

GO:0005788

Endoplasmic reticulum lumen

5

41

1.02E-05

GO:0008610

Lipid biosynthetic process

5

42

1.15E-05

GO:0009705

Plant-type vacuole membrane

8

149

1.16E-05

GO:0009733

Response to auxin stimulus

12

376

1.72E-05

GO:0042409

Caffeoyl-COA O-methyltransferase activity

3

10

4.00E-05

GO:0005576

Extracellular region

7

142

7.08E-05

GO:0003824

Catalytic activity

26

1598

7.46E-05

GO:0031012

Extracellular matrix

4

34

9.47E-05

GO:0005199

Structural constituent of cell wall

3

15

0.000148

GO:0005975

Carbohydrate metabolic process

14

625

0.000162

GO:0016706

Oxidoreductase activity, acting on paired donors

4

42

0.000219

GO:0005506

Iron ion binding

7

175

0.000259

GO:0016832

Aldehyde-lyase activity

3

19

0.000308

GO:0016614

Oxidoreductase activity, acting on CH-OH group of donors

3

22

0.000483

GO:0016765

Transferase activity, transferring alkyl or aryl (other than methyl) groups

2

6

0.000728

GO:0006979

Response to oxidative stress

11

504

0.000992

GO:0009753

Response to jasmonic acid stimulus

8

295

0.001253

GO:0009821

Alkaloid biosynthetic process

3

35

0.001917

GO:0016844

Strictosidine synthase activity

3

38

0.002433

GO:0016491

Oxidoreductase activity

12

663

0.002847

  1. Note: There are 290 significant genes in the 41,162 downregulated genes