Table 4 List of selected miRNAs sponged by circRNAs and their target mRNAs in the root
From: Identification of cucumber circular RNAs responsive to salt stress
circRNA | log2FC | FDR | sponged miRNA | target mRNA | annotation |
|---|---|---|---|---|---|
Chr1:26661035|26687720 | −4.43 | 0.008 | scaffold01066:88458_88477 | Csa3G736760 | ethylene-responsive transcription factor RAP2-like |
Chr1:26677510|26687733 | −5.25 | 0.003 |  | Csa4G292470 | ethylene-responsive transcription factor RAP2-like |
| Â | Â | Â | Â | Csa5G175970 | ethylene-responsive transcription factor RAP2-like |
| Â | Â | Â | Â | Csa6G296960 | ethylene-responsive transcription factor RAP2-like |
Chr3:14927566|14937448 | −3.52 | 0.027 | csa-miRn6-3p | Csa6G128610 | ethylene-responsive transcription factor ERF054-like |
Chr7:14083607|14090637 | 6.46 | 0.002 | Â | Csa5G139630 | ethylene-responsive transcription factor CRF4-like |
Chr6:19177739|19183752 | −4.43 | 0.008 | miR159b | Csa4G022940 | transcription factor MYB29-like |
Chr1:1271310|1273631 | 3.80 | 0.023 | csa-miR-171 l | Csa1G051590 | squamosa promoter-binding-like protein 13A-like |
| Â | Â | Â | Â | Csa6G094760 | squamosa promoter-binding-like protein 16-like |
Chr3:14927566|14937448 | −3.52 | 0.027 | csa-miRn6-3p | Csa4G377720 | protein ABSCISIC ACID-INSENSITIVE 5-like |
Chr7:14083607|14090637 | 6.46 | 0.002 | Â | Csa4G377720 | protein ABSCISIC ACID-INSENSITIVE 5-like |