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Table 1 Summary statistics based on the RNA-seq data

From: Comparative transcriptome analysis reveals significant differences in the regulation of gene expression between hydrogen cyanide- and ethylene-treated Arabidopsis thaliana

Items CK1 CK2 CK3 ET1 ET2 ET3 HCN1 HCN2 HCN3
Total Reads Count (#) 51,411,652 50,093,432 52,262,894 52,902,026 55,269,380 52,933,184 50,501,232 52,499,638 49,344,474
Total Bases Count (kp) 6,426,456.5 6,261,679 6,532,861.75 6,612,753.25 6,908,672.5 6,616,648 6,312,654 6,562,454.75 6,168,059.25
Average Read Length (bp) 125 125 125 125 125 125 125 125 125
Good sequences (#) 51,125,475 49,799,559 51,981,493 52,585,313 54,966,768 52,636,272 50,195,794 52,200,589 49,021,051
Good ratio (%) 99.44 99.41 99.46 99.4 99.45 99.44 99.4 99.43 99.34
Q30 Bases Ratio (%) 91.20 91.13 91.25 91.18 91.05 90.96 91.03 90.86 90.88
Q20 Bases Ratio (%) 95.72 95.67 95.76 95.70 95.65 95.60 95.62 95.55 95.53
GC Bases Ratio (%) 45.69 45.70 45.78 46.00 45.89 45.77 46.09 46.02 45.89
Total mapped 47,985,088 (94.31%) 46,340,714 (93.52%) 48,339,117 (93.42%) 48,925,996 (93.53%) 51,215,376 (93.62%) 49,011,714 (93.57%) 46,807,186 (93.74%) 49,092,621 (94.50%) 45,873,876 (94.11%)
Unique mapped 47,004,223 (92.38%) 45,813,306 (92.46%) 47,788,558 (92.36%) 48,310,664 (92.36%) 50,594,553 (92.49%) 48,390,954 (92.38%) 46,222,496 (92.57%) 48,488,187 (93.34%) 45,300,714 (92.93%)