Table 1 Identification of cis-acting elements in the CmLOX08 promoter using the PlantCARE and PLACE databases
Cis-elements | Description | Position from ATG | No. |
|---|---|---|---|
HSE | cis-acting element involved in heat stress responsiveness | −1990, − 1332, − 1015, − 709, − 454 | 5 |
GAG-motif | part of a light responsive element | − 1883 | 1 |
Box-W1 | fungal elicitor responsive element | − 1859 | 1 |
WRKY71OS | Core of W-box, transcriptional repressor of GA signal | − 1863, − 1182, − 1063, − 1023, − 784, − 730, − 173 | 7 |
WBOXATNPR1 | Regulates NPR1, SA-induced | −1859, − 1183, − 1064 | 3 |
ARE | cis-acting regulatory element essential for the anaerobic induction | − 1851 | 1 |
TCA-element | cis-acting element involved in salicylic acid responsiveness | − 1796,-1564, − 1205, − 510, − 474, − 82 | 6 |
MRE | MYB binding site involved in light responsiveness | − 1557 | 1 |
TC-rich repeats | cis-acting element involved in defense and stress responsiveness | − 1548, 1384, − 1262 | 3 |
CCAATBOX1 | Act cooperatively with HSE to increase the activity of the promoter | − 1515, − 1027, − 1005, − 228 | 4 |
TBOXATGAPB | Involved in light-activated transcription | − 1462 | 1 |
Box I | light responsive element | − 1367, − 443 | 2 |
TGA-element | auxin-responsive element | − 1344, − 132 | 2 |
CAAT-box | common cis-acting element in promoter and enhancer regions | − 1669,-1477,-1273, − 1219,-993, − 934,-778,-459,-379,-248,-150 | 11 |
BIHD1OS | Binding site of OsBIHD1 in disease resistance responses | − 1178, − 780, − 169 | 3 |
PYRIMIDINEB | involved in sugar repression and the regulation of gibberellin-responsive genes | − 1126 | 1 |
MBS | MYB binding site involved in drought-inducibility | − 1098 | 1 |
MYB2AT | Binding site for ATMYB2 that involved in the regulation of dehydration-responsive genes | −1098 | 1 |
IBOXCORE | Light-responsive element | − 1056, − 890 | 2 |
TATCCAOSAMY | Gibberellin response element in sugar sensitivity of alpha-amylase genes | − 1051 | 1 |
REALPHALGLHCB21 | Required for phytochrome regulation | − 1007 | 1 |
TCCC-motif | part of a light responsive element | − 847 | 1 |
GT1GMSCAM4 | Plays a role in pathogen- and salt-induced SCaM-4 gene expression | − 822, − 269 | 2 |
GARE-motif | gibberellin-responsive element | − 400 | 1 |
TATA-box | core promoter element around − 30 of transcription start | − 1980,-1756,-1391,-1288,-1074,-805,− 674,-642,-631,-580, − 286 | 11 |
GT1-motif | light responsive element | − 279 | 1 |
ABRE | cis-acting element involved in the abscisic acid responsiveness | −200 | 1 |
ACGTATERD1 | required for etiolation-induced expression of erd1 (early responsive to dehydration) | −201 | 1 |
LTR | cis-acting element involved in low-temperature responsiveness | − 181 | 1 |
CGTCA-motif | cis-acting regulatory element involved in the MeJA-responsiveness | −136 | 1 |