Skip to main content

Table 3 Stress-induced DMGs involved in metabolism processes and their demethylated types in soybean

From: High-resolution DNA methylome reveals that demethylation enhances adaptability to continuous cropping comprehensive stress in soybean

Abbreviation Full name of enzyme Gene name in Soybean DMG Type
HK hexokinase [EC:2.7.1.1] Glyma07g12190 CG
GPI glucose-6-phosphate isomerase [EC:5.3.1.9] Glyma19g02031 CHG
PFK 6-phosphofructokinase 1 [EC:2.7.1.11] Glyma18g22780 CHG
aceE pyruvate dehydrogenase E1 component [EC:1.2.4.1] Glyma07g03930; Glyma17g03560 CHG; CHG
CS citrate synthase [EC:2.3.3.1] Glyma18g12393 CHG
IDH isocitrate dehydrogenase [EC:1.1.1.42] Glyma08g17080 CHG
OGDH 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Glyma17g03560 CG/CHG; CHG
ACACA acetyl-CoA carboxylase [EC:6.4.1.2 6.3.4.14 2.1.3.15] Glyma04g11550 CHG
fabD [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Glyma18g06500 CG
ALT alanine transaminase [EC:2.6.1.2] Glyma02g04320 CG
glyA glycine hydroxymethyltransferase [EC:2.1.2.1] Glyma18g27710 CHG
GLDC glycine dehydrogenase [EC:1.4.4.2] Glyma17g34690 CG
AMT aminomethyltransferase [EC:2.1.2.10] Glyma15g11590 CG
cysK cysteine synthase A [EC:2.5.1.47] Glyma02g15640; Glyma15g41600 CHG; CHG
metE 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase [EC:2.1.1.14] Glyma17g23730 CHG
DNMT1 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] Glyma11g08861; Glyma01g01120; Glyma16g17720 CHG; CG; CG/CHG
OTC ornithine carbamoyltransferase [EC:2.1.3.3] Glyma06g03361 CG
GSR glutathione reductase (NADPH) [EC:1.8.1.7] Glyma02g08180 CHG
FNR ferredoxin-NADP(+) reductase [EC 1.18.1.2] Glyma08g17080 CHG