Table 3 Classification of DEGs during fruit set into Gene Ontology (GO)
From: First RNA-seq approach to study fruit set and parthenocarpy in zucchini (Cucurbita pepo L.)
PF MU16 vs | AF MU16 vs | PF WHT vs | AF WHT vs | UF WHT vs | |
|---|---|---|---|---|---|
UF MU16 | UF MU16 | UF WHT | UF WHT | UFMU16 | |
GO Biological Process (%) | |||||
metabolic process | 52.88 | 58.47 | 51.90 | 52.90 | 53.55 |
cellular process | 40.22 | 41.53 | 41.25 | 39.99 | 38.85 |
response to stimulus | 6.91 | – | – | – | – |
single-organism process | – | – | 6.85 | 7.12 | 7.61 |
GO Molecular function (%) | |||||
binding | 57.43 | 56.46 | 56.59 | 54.65 | 55.15 |
catalytic activity | 42.57 | 43.54 | 43.41 | 45.35 | 44.85 |
GO Cellular Component (%) | |||||
cell | 27.58 | 23.39 | 28.79 | 26.33 | 26.53 |
cell part | 27.58 | 23.39 | 28.72 | 26.33 | 26.53 |
membrane | 25.62 | 38.53 | 23.17 | 30.59 | 30.68 |
organelle | 19.22 | 14.68 | 19.32 | 16.74 | 16.25 |