From: First RNA-seq approach to study fruit set and parthenocarpy in zucchini (Cucurbita pepo L.)
PF MU16 vs UF MU16 | PF MU16 vs UF MU16 | PF MU16 vs UF MU16 | PF MU16 vs UF MU16 | PF MU16 vs UF MU16 | |
---|---|---|---|---|---|
Database | |||||
C. pepo trancriptome v3 | 3539 54.62% | 1249 57.14% | 6231 59.36% | 3354 58.66% | 3261 53.28% |
A. thaliana genome | 2177 33.60% | 734 33.58% | 3951 37.64% | 1988 34.77% | 1826 29.84% |
A. thaliana péptides | 2875 44.37% | 995 45.52% | 5122 48.79% | 2701 47.24% | 2564 41.90% |
NCBI Nucleotide collection nr | 3581 55.27% | 1255 57.41% | 6276 59.79% | 3748 65.55% | 3194 52.19% |
Swiss prot | 2398 37.01% | 850 38.88% | 4226 40.26% | 2238 39.14% | 2142 35.00% |
Cucurbita pepo ssp.ovifera | 3489 53.85% | 1273 58.23% | 5878 56.00 | 3247 56.79% | 3331 54.43% |
IntrePro | 2659 41.04% | 1367 62.53% | 6805 64.83% | 3671 64.20% | 3793 61.98% |
Gene Ontology GO term | 1650 25.47% | 623 28.50% | 3089 29.43% | 1632 28.54% | 1598 26.11% |
KEGG Pathway | 275 4.24% | 114 5.22% | 564 5.37% | 312 5.46% | 286 4.67% |