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Table 2 Distribution of anti-codons in the chloroplast genome of the monocot plants

From: Genomic and evolutionary aspects of chloroplast tRNA in monocot plants

tRNA Isotypes

Isoacceptors

Oryza nivara (29)

 Alanine

AGC

GGC

CGC

UGC (2)

  

 Glycine

ACC

GCC (1)

CCC

UCC (1)

  

 Proline

AGG

GGG

CGG

UGG (1)

  

 Threonine

AGU

GGU (1)

CGU

UGU (1)

  

 Valine

AAC

GAC (2)

CAC

UAC (1)

  

 Serine

AGA

GGA (1)

CGA

UGA (1)

ACU

GCU (1)

 Arginine

ACG (2)

GCG

CCG

UCG

CCU

UCU (1)

 Leucine

AAG

GAG

CAG

UAG (1)

CAA (2)

UAA (1)

 Phenylalanine

AAA

GAA (1)

    

 Asparagine

AUU

GUU (2)

    

 Lysine

CUU

UUU (1)

    

 Aspartate

AUC

GUC (1)

    

 Glutamate

CUC

UUC (1)

    

 Histidine

AUG

GUG (2)

    

 Glutamine

CUG

UUG (1)

    

 Isoleucine

AAU

GAU (2)

CAU (2)

   

 Methionine

CAU (4)

     

 Tyrosine

AUA

GUA (1)

    

 Cysteine

ACA

GCA (1)

    

 Tryptophan

CCA (1)

     

 Supressor

CUA

UUA

    

 Selenocysteine

UCA

     

Oryza sativa (26)

 Alanine

AGC

GGC

CGC

UGC (2)

  

 Glycine

ACC

GCC (1)

CCC

UCC

  

 Proline

AGG

GGG

CGG

UGG (1)

  

 Threonine

AGU

GGU (1)

CGU

UGU (1)

  

 Valine

AAC

GAC (2)

CAC

UAC

  

 Serine

AGA

GGA (1)

CGA

UGA (1)

ACU

GCU (1)

 Arginine

ACG (2)

GCG

CCG

UCG

CCU

UCU (1)

 Leucine

AAG

GAG

CAG

UAG (1)

CAA (2)

UAA (1)

 Phenylalanine

AAA

GAA (1)

    

 Asparagine

AUU

GUU (2)

    

 Lysine

CUU

UUU

    

 Aspartate

AUC

GUC (1)

    

 Glutamate

CUC

UUC (1)

    

 Histidine

AUG

GUG (2)

    

 Glutamine

CUG

UUG (1)

    

 Isoleucine

AAU

GAU (2)

CAU (2)

   

 Methionine

CAU (4)

     

 Tyrosine

AUA

GUA (1)

    

 Cysteine

ACA

GCA (1)

    

 Tryptophan

CCA (1)

     

 Supressor

CUA

UUA

    

 Selenocysteine

UCA

     

Saccharum officinarum (29)

 Alanine

AGC

GGC

CGC

UGC (2)

  

 Glycine

ACC

GCC (1)

CCC

UCC (1)

  

 Proline

AGG

GGG

CGG

UGG (1)

  

 Threonine

AGU

GGU (1)

CGU

UGU (1)

  

 Valine

AAC

GAC (2)

CAC

UAC (1)

  

 Serine

AGA

GGA (1)

CGA

UGA (1)

ACU

GCU (1)

 Arginine

ACG (2)

GCG

CCG

UCG

CCU

UCU (1)

 Leucine

AAG

GAG

CAG

UAG (1)

CAA (2)

UAA (1)

 Phenylalanine

AAA

GAA (1)

    

 Asparagine

AUU

GUU (2)

    

 Lysine

CUU

UUU (1)

    

 Aspartate

AUC

GUC (1)

    

 Glutamate

CUC

UUC (1)

    

 Histidine

AUG

GUG (2)

    

 Glutamine

CUG

UUG (1)

    

 Isoleucine

AAU

GAU (2)

CAU (2)

   

 Methionine

CAU (4)

     

 Tyrosine

AUA

GUA (1)

    

 Cysteine

ACA

GCA (1)

    

 Tryptophan

CCA (1)

     

 Supressor

CUA

UUA

    

 Selenocysteine

UCA

     

Sorghum bicolor (23)

 Alanine

AGC

GGC

CGC

UGC

  

 Glycine

ACC

GCC (1)

CCC

UCC

  

 Proline

AGG

GGG

CGG

UGG (1)

  

 Threonine

AGU

GGU

CGU

UGU (1)

  

 Valine

AAC

GAC (2)

CAC

UAC

  

 Serine

AGA

GGA (1)

CGA

UGA (1)

ACU

GCU (1)

 Arginine

ACG (2)

GCG

CCG

UCG

CCU

UCU (1)

 Leucine

AAG

GAG

CAG

UAG (1)

CAA (2)

UAA

 Phenylalanine

AAA

GAA (1)

    

 Asparagine

AUU

GUU (2)

    

 Lysine

CUU

UUU

    

 Aspartate

AUC

GUC (1)

    

 Glutamate

CUC

UUC (1)

    

 Histidine

AUG

GUG (2)

    

 Glutamine

CUG

UUG (1)

    

 Isoleucine

AAU

GAU (2)

CAU (2)

   

 Methionine

CAU (4)

     

 Tyrosine

AUA

GUA (1)

    

 Cysteine

ACA

GCA (1)

    

 Tryptophan

CCA (1)

     

 Supressor

CUA

UUA

    

 Selenocysteine

UCA

     

Triticum aestivum (28)

 Alanine

AGC

GGC

CGC

UGC (2)

  

 Glycine

ACC

GCC (1)

CCC

UCC (1)

  

 Proline

AGG

GGG

CGG

UGG (1)

  

 Threonine

AGU

GGU (1)

CGU

UGU (1)

  

 Valine

AAC

GAC (2)

CAC

UAC (1)

  

 Serine

AGA

GGA (1)

CGA

UGA (1)

ACU

GCU (1)

 Arginine

ACG (2)

GCG

CCG

UCG

CCU

UCU (1)

 Leucine

AAG

GAG

CAG

UAG (1)

CAA (2)

UAA (1)

 Phenylalanine

AAA

GAA (1)

    

 Asparagine

AUU

GUU (2)

    

 Lysine

CUU

UUU (1)

    

 Aspartate

AUC

GUC (1)

    

 Glutamate

CUC

UUC (1)

    

 Histidine

AUG

GUG (1)

    

 Glutamine

CUG

UUG

    

 Isoleucine

AAU

GAU (2)

CAU (2)

   

 Methionine

CAU (5)

     

 Tyrosine

AUA

GUA (1)

    

 Cysteine

ACA

GCA (1)

    

 Tryptophan

CCA (1)

     

 Supressor

CUA

UUA

    

 Selenocysteine

UCA

     

Zea mays (29)

 Alanine

AGC

GGC

CGC

UGC (2)

  

 Glycine

ACC

GCC (1)

CCC

UCC (1)

  

 Proline

AGG

GGG

CGG

UGG (1)

  

 Threonine

AGU

GGU (2)

CGU

UGU (1)

  

 Valine

AAC

GAC (2)

CAC

UAC (1)

  

 Serine

AGA

GGA (1)

CGA

UGA (1)

ACU

GCU (1)

 Arginine

ACG (2)

GCG

CCG

UCG

CCU

UCU (1)

 Leucine

AAG

GAG

CAG

UAG (1)

CAA (2)

UAA (1)

 Phenylalanine

AAA

GAA (1)

    

 Asparagine

AUU

GUU (2)

    

 Lysine

CUU

UUU (1)

    

 Aspartate

AUC

GUC (1)

    

 Glutamate

CUC

UUC (1)

    

 Histidine

AUG

GUG (2)

    

 Glutamine

CUG

UUG (1)

    

 Isoleucine

AAU

GAU (2)

CAU (2)

   

 Methionine

CAU (2)

     

 Tyrosine

AUA

GUA (1)

    

 Cysteine

ACA

GCA (1)

    

 Tryptophan

CCA (1)

     

 Supressor

CUA

UUA

    

 Selenocysteine

UCA

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