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Table 2 Significantly enriched pathways of DEGs in ‘Red Delicious’ and its four generation mutants

From: Anthocyanin accumulation correlates with hormones in the fruit skin of ‘Red Delicious’ and its four generation bud sport mutants

Pathway ID

Pathway

Number of DEGs

Enrichment factor

Q-value (<0.05)

 

G0 versus G1

   

ko04626

Plant-pathogen interaction

14

3.97

0.000516177001036455

ko04075

Plant hormone signal transduction

16

3.46

0.000621209033772607

ko00909

Sesquiterpenoid and triterpenoid biosynthesis

4

9.64

0.0409888977775863

 

G0 versus G2

   

ko00941

Flavonoid biosynthesis

16

8.82

1.55373225396715e-09

ko04626

Plant-pathogen interaction

25

3.08

3.9124668653967e-05

ko04712

Circadian rhythm - plant

9

4.96

0.00618212628781434

ko04075

Plant hormone signal transduction

24

2.26

0.0120396678678723

ko00909

Sesquiterpenoid and triterpenoid biosynthesis

6

6.28

0.027494105974142

 

G0 versus G3

   

ko04075

Plant hormone signal transduction

53

2.60

7.99624033653856e-09

ko00941

Flavonoid biosynthesis

15

4.31

0.000139485985032328

ko00909

Sesquiterpenoid and triterpenoid biosynthesis

10

5.46

0.000908007889189655

ko04626

Plant-pathogen interaction

34

2.18

0.00135034354389485

ko04712

Circadian rhythm - plant

12

3.45

0.0158793441067531

ko00900

Terpenoid backbone biosynthesis

12

3.16

0.0371242613055638

 

G0 versus G4

   

ko00196

Photosynthesis - antenna proteins

11

6.29

6.37521150037568e-05

ko04712

Circadian rhythm - plant

15

3.84

0.000640829801345832

ko00941

Flavonoid biosynthesis

15

3.84

0.000640829801345832

ko00900

Terpenoid backbone biosynthesis

15

3.51

0.00196937336544101

ko04075

Plant hormone signal transduction

44

1.92

0.00212458752282485

 

G1 versus G2

   

ko00944

Flavone and flavonol biosynthesis

2

173.44

0.00100183440108559

ko00941

Flavonoid biosynthesis

4

18.26

0.00125854608191001

 

G2 versus G3

   

ko04075

Plant hormone signal transduction

22

3.04

0.000165774159370358

 

G3 versus G4

   

ko04075

Plant hormone signal transduction

16

4.21

4.46200952750608e-05