TY - STD TI - Kadarusman YB, Herabadi AG. Improving sustainable development within Indonesian palm oil: the importance of the reward system. Sust Dev. 2018. https://doi.org/10.1002/sd.1715. ID - ref1 ER - TY - JOUR AU - Varkkey, H. AU - Tyson, A. AU - Choiruzzad, S. A. B. PY - 2018 DA - 2018// TI - Palm oil intensification and expansion in Indonesia and Malaysia: environmental and socio-political factors influencing policy JO - Forest Policy Econ VL - 92 UR - https://doi.org/10.1016/j.forpol.2018.05.002 DO - 10.1016/j.forpol.2018.05.002 ID - Varkkey2018 ER - TY - JOUR AU - Stichnothe, H. AU - Schuchardt, F. AU - Rahutomo, S. PY - 2014 DA - 2014// TI - European renewable energy directive: critical analysis of important default values and methods for calculating greenhouse gas (GHG) emissions of palm oil biodiesel JO - Int J LCA VL - 19 UR - https://doi.org/10.1007/s11367-014-0738-x DO - 10.1007/s11367-014-0738-x ID - Stichnothe2014 ER - TY - JOUR AU - Kurnia, J. AU - Jangam, S. AU - Akhtar, S. PY - 2016 DA - 2016// TI - Advances in biofuel production from oil palm and palm oil processing wastes: a review JO - Biofuel Res J VL - 3 UR - https://doi.org/10.18331/BRJ2016.3.1.3 DO - 10.18331/BRJ2016.3.1.3 ID - Kurnia2016 ER - TY - STD TI - Malaysian Palm Oil Board (MPOB) monthly export of oil palm products – 2017. http://bepi.mpob.gov.my/index.php/en/statistics/export/180-export-2017/811-monthly-export-of-oil-palm-products-2017.html. Accessed 10 April 2018. UR - http://bepi.mpob.gov.my/index.php/en/statistics/export/180-export-2017/811-monthly-export-of-oil-palm-products-2017.html ID - ref5 ER - TY - JOUR AU - Roslan, A. AU - Idris, A. PY - 2012 DA - 2012// TI - Economic impact of Ganoderma incidence on Malaysian oil palm plantation–a case study in Johor JO - Oil Palm Industry Econ J VL - 12 ID - Roslan2012 ER - TY - CHAP AU - Moncalvo, J. M. ED - Flood, J. ED - Bridge, P. D. ED - Holderness, M. PY - 2000 DA - 2000// TI - Systematics of Ganoderma BT - Ganoderma diseases of perennial crops PB - CAB International CY - Wallingford UR - https://doi.org/10.1079/9780851993881.0023 DO - 10.1079/9780851993881.0023 ID - Moncalvo2000 ER - TY - JOUR AU - Susanto, A. AU - Sudharto, P. AU - Purba, R. PY - 2005 DA - 2005// TI - Enhancing biological control of basal stem rot disease (Ganoderma boninense) in oil palm plantations JO - Mycopathologia VL - 159 UR - https://doi.org/10.1007/s11046-004-4438-0 DO - 10.1007/s11046-004-4438-0 ID - Susanto2005 ER - TY - JOUR AU - Rees, R. W. AU - Flood, J. AU - Hasan, Y. AU - Cooper, R. M. PY - 2007 DA - 2007// TI - Effects of inoculum potential , shading and soil temperature on root infection of oil palm seedlings by the basal stem rot pathogen Ganoderma boninense JO - Plant Pathol VL - 56 UR - https://doi.org/10.1111/j.1365-3059.2007.01621.x DO - 10.1111/j.1365-3059.2007.01621.x ID - Rees2007 ER - TY - JOUR AU - GaitFee, C. PY - 2011 DA - 2011// TI - Management of Ganoderma diseases in oil palm plantations JO - Planter VL - 87 ID - GaitFee2011 ER - TY - STD TI - Chong KP, Dayou J, Alexander A. Pathogenic nature of Ganoderma boninense and basal stem rot disease. In: Chong KP, Dayou J, Alexander A, editors. Detection and control of Ganoderma boninense in oil palm crop. Cham: Springer; 2017. p. 5–12. ID - ref11 ER - TY - STD TI - Corley RHV, Tinker PB. Vegetative propagation and biotechnology. In: Corley RHV, Tinker PB, editors. The oil palm: Wiley; 2003. p. 201–15. ID - ref12 ER - TY - JOUR AU - Morkunas, I. AU - Ratajczak, L. PY - 2014 DA - 2014// TI - The role of sugar signaling in plant defense responses against fungal pathogens JO - Acta Physiol Plant VL - 36 UR - https://doi.org/10.1007/s11738-014-1559-z DO - 10.1007/s11738-014-1559-z ID - Morkunas2014 ER - TY - JOUR AU - Lam, E. AU - Kato, N. AU - Lawton, M. PY - 2001 DA - 2001// TI - Programmed cell death, mitochondria and the plant hypersensitive response JO - Nature VL - 411 UR - https://doi.org/10.1038/35081184 DO - 10.1038/35081184 ID - Lam2001 ER - TY - JOUR AU - Zhao, Z. AU - Liu, H. AU - Wang, C. AU - Xu, J. R. PY - 2013 DA - 2013// TI - Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi JO - BMC Genomics VL - 14 UR - https://doi.org/10.1186/1471-2164-14-274 DO - 10.1186/1471-2164-14-274 ID - Zhao2013 ER - TY - JOUR AU - Bellincampi, D. AU - Cervone, F. AU - Lionetti, V. PY - 2014 DA - 2014// TI - Plant cell wall dynamics and wall-related susceptibility in plant–pathogen interactions JO - Front Plant Sci VL - 5 UR - https://doi.org/10.3389/fpls.2014.00228 DO - 10.3389/fpls.2014.00228 ID - Bellincampi2014 ER - TY - JOUR AU - Sattler, S. AU - Funnell-Harris, D. PY - 2013 DA - 2013// TI - Modifying lignin to improve bioenergy feedstocks: strengthening the barrier against pathogens? JO - Front Plant Sci VL - 4 UR - https://doi.org/10.3389/fpls.2013.00070 DO - 10.3389/fpls.2013.00070 ID - Sattler2013 ER - TY - JOUR AU - Hok, S. AU - Attard, A. AU - Keller, H. PY - 2010 DA - 2010// TI - Getting the most from the host: how pathogens force plants to cooperate in disease JO - Mol Plant-Microbe Interact VL - 23 UR - https://doi.org/10.1094/MPMI-04-10-0103 DO - 10.1094/MPMI-04-10-0103 ID - Hok2010 ER - TY - JOUR AU - Cantu, D. AU - Blanco-Ulate, B. AU - Yang, L. AU - Labavitch, J. M. AU - Bennett, A. B. AU - Powell, A. L. PY - 2009 DA - 2009// TI - Ripening-regulated susceptibility of tomato fruit to Botrytis cinerea requires NOR but not RIN or ethylene JO - Plant Physiol VL - 150 UR - https://doi.org/10.1104/pp.109.138701 DO - 10.1104/pp.109.138701 ID - Cantu2009 ER - TY - JOUR AU - Pazzagli, L. AU - Seidl-Seiboth, V. AU - Barsottini, M. AU - Vargas, W. A. AU - Scala, A. AU - Mukherjee, P. K. PY - 2014 DA - 2014// TI - Cerato-platanins: elicitors and effectors JO - Plant Sci VL - 228 UR - https://doi.org/10.1016/j.plantsci.2014.02.009 DO - 10.1016/j.plantsci.2014.02.009 ID - Pazzagli2014 ER - TY - JOUR AU - Quarantin, A. AU - Glasenapp, A. AU - Schäfer, W. AU - Favaron, F. AU - Sella, L. PY - 2016 DA - 2016// TI - Involvement of the Fusarium graminearum cerato-platanin proteins in fungal growth and plant infection JO - Plant Physiol Biochem VL - 109 UR - https://doi.org/10.1016/j.plaphy.2016.10.001 DO - 10.1016/j.plaphy.2016.10.001 ID - Quarantin2016 ER - TY - JOUR AU - Kabbage, M. AU - Yarden, O. AU - Dickman, M. B. PY - 2015 DA - 2015// TI - Pathogenic attributes of Sclerotinia sclerotiorum: switching from a biotrophic to necrotrophic lifestyle JO - Plant Sci VL - 233 UR - https://doi.org/10.1016/j.plantsci.2014.12.018 DO - 10.1016/j.plantsci.2014.12.018 ID - Kabbage2015 ER - TY - JOUR AU - Vargas, W. A. AU - Martín, J. M. S. AU - Rech, G. E. AU - Rivera, L. P. AU - Benito, E. P. AU - Díaz-Mínguez, J. M. AU - Thon, M. R. AU - Sukno, S. A. PY - 2012 DA - 2012// TI - Plant defense mechanisms are activated during biotrophic and necrotrophic development of Colletotricum graminicola in maize JO - Plant Physiol VL - 158 UR - https://doi.org/10.1104/pp.111.190397 DO - 10.1104/pp.111.190397 ID - Vargas2012 ER - TY - JOUR AU - Idris, A. S. AU - Kushairi, A. AU - Ismail, S. AU - Ariffin, D. PY - 2004 DA - 2004// TI - Selection for partial resistance in oil palm progenies to Ganoderma basal stem rot JO - J Oil Palm Res VL - 16 ID - Idris2004 ER - TY - STD TI - Sustainable Oil Palm Farming / Tenera, Dura, and Pisifera. http://akvopedia.org/wiki/Sustainable_Oil_Palm_Farming_/_Tenera,_Dura,_and_Pisifera. Accessed 10 April 2018. UR - http://akvopedia.org/wiki/Sustainable_Oil_Palm_Farming_/_Tenera ID - ref25 ER - TY - JOUR AU - Kushairi, A. AU - Jalani, B. S. AU - Rajanaidu, N. AU - Zakri, A. H. PY - 1994 DA - 1994// TI - Variation in Dura × Pisifera planting materials, 1: bunch yield JO - Elaeis VL - 6 ID - Kushairi1994 ER - TY - JOUR AU - Nusaibah, S. A. AU - Akmar, A. S. N. AU - Idris, A. S. AU - Sariah, M. AU - Pauzi, Z. M. PY - 2016 DA - 2016// TI - Involvement of metabolites in early defense mechanism of oil palm (Elaeis guineensis Jacq.) against Ganoderma disease JO - Plant Physiol Biochem VL - 109 UR - https://doi.org/10.1016/j.plaphy.2016.09.014 DO - 10.1016/j.plaphy.2016.09.014 ID - Nusaibah2016 ER - TY - JOUR AU - Ho, C. L. AU - Tan, Y. C. AU - Yeoh, K. A. AU - Ghazali, A. K. AU - Yee, W. Y. AU - Hoh, C. C. PY - 2016 DA - 2016// TI - De novo transcriptome analyses of host-fungal interactions in oil palm (Elaeis guineensis Jacq.) JO - BMC Genomics VL - 17 UR - https://doi.org/10.1186/s12864-016-2368-0 DO - 10.1186/s12864-016-2368-0 ID - Ho2016 ER - TY - JOUR AU - Ho, C. L. AU - Tan, Y. C. AU - Yeoh, K. A. AU - Lee, W. K. AU - Ghazali, A. K. AU - Yee, W. Y. AU - Hoh, C. C. PY - 2018 DA - 2018// TI - Transcriptional response of oil palm (Elaeis guineensis Jacq.) inoculated simultaneously with both Ganoderma boninense and Trichoderma harzianum JO - Plant Gene VL - 13 UR - https://doi.org/10.1016/j.plgene.2018.01.003 DO - 10.1016/j.plgene.2018.01.003 ID - Ho2018 ER - TY - JOUR AU - Lorenzo, O. AU - Chico, J. M. AU - Sanchez-Serrano, J. J. AU - Solano, R. PY - 2004 DA - 2004// TI - JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis JO - Plant Cell VL - 16 UR - https://doi.org/10.1105/tpc.022319 DO - 10.1105/tpc.022319 ID - Lorenzo2004 ER - TY - JOUR AU - Pozo, M. J. AU - Ent, S. AU - Loon, L. C. AU - Pieterse, C. M. PY - 2008 DA - 2008// TI - Transcription factor MYC2 is involved in priming for enhanced defense during rhizobacteria-induced systemic resistance in Arabidopsis thaliana JO - New Phytol VL - 180 UR - https://doi.org/10.1111/j.1469-8137.2008.02578.x DO - 10.1111/j.1469-8137.2008.02578.x ID - Pozo2008 ER - TY - JOUR AU - Hiruma, K. AU - Nishiuchi, T. AU - Kato, T. AU - Bednarek, P. AU - Okuno, T. AU - Schulze-Lefert, P. AU - Takano, Y. PY - 2011 DA - 2011// TI - Arabidopsis ENHANCED DISEASE RESISTANCE 1 is required for pathogen-induced expression of plant defensins in nonhost resistance, and acts through interference of MYC2-mediated repressor function JO - Plant J VL - 67 UR - https://doi.org/10.1111/j.1365-313X.2011.04651.x DO - 10.1111/j.1365-313X.2011.04651.x ID - Hiruma2011 ER - TY - JOUR AU - Kloppholz, S. AU - Kuhn, H. AU - Requena, N. PY - 2011 DA - 2011// TI - A secreted fungal effector of Glomus intraradices promotes symbiotic biotrophy JO - Curr Biol VL - 21 UR - https://doi.org/10.1016/j.cub.2011.06.044 DO - 10.1016/j.cub.2011.06.044 ID - Kloppholz2011 ER - TY - JOUR AU - Liu, G. AU - Kennedy, R. AU - Greenshields, D. L. AU - Peng, G. AU - Forseille, L. AU - Selvaraj, G. AU - Wei, Y. PY - 2007 DA - 2007// TI - Detached and attached Arabidopsis leaf assays reveal distinctive defense responses against hemibiotrophic Colletotrichum spp JO - Mol Plant-Microbe Interact VL - 20 UR - https://doi.org/10.1094/MPMI-20-10-1308 DO - 10.1094/MPMI-20-10-1308 ID - Liu2007 ER - TY - JOUR AU - Kendziorski, C. AU - Irizarry, R. A. AU - Chen, K. S. AU - Haag, J. D. AU - Gould, M. N. PY - 2005 DA - 2005// TI - On the utility of pooling biological samples in microarray experiments JO - Proc Natl Acad Sci U S A VL - 102 UR - https://doi.org/10.1073/pnas.0500607102 DO - 10.1073/pnas.0500607102 ID - Kendziorski2005 ER - TY - STD TI - Biswas S, Agrawal YN, Mucyn TS, Dangl JL, Jones CD. Biological averaging in RNA-seq. Quant. Methods arXiv 2013;1309.0670 [q-bio.QM]. ID - ref36 ER - TY - JOUR AU - Wagner, G. P. AU - Kin, K. AU - Lynch, V. J. PY - 2012 DA - 2012// TI - Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples JO - Theor Biosci VL - 131 UR - https://doi.org/10.1007/s12064-012-0162-3 DO - 10.1007/s12064-012-0162-3 ID - Wagner2012 ER - TY - JOUR AU - Anders, S. AU - Huber, W. PY - 2010 DA - 2010// TI - Differential expression analysis for sequence count data JO - Genome Biol VL - 11 UR - https://doi.org/10.1186/gb-2010-11-10-r106 DO - 10.1186/gb-2010-11-10-r106 ID - Anders2010 ER - TY - JOUR AU - Colangelo, E. P. AU - Guerinot, M. L. PY - 2004 DA - 2004// TI - The essential basic helix-loop-helix protein FIT1 is required for the iron deficiency response JO - Plant Cell VL - 16 UR - https://doi.org/10.1105/tpc.104.024315 DO - 10.1105/tpc.104.024315 ID - Colangelo2004 ER - TY - JOUR AU - Senthil-Kumar, M. AU - Mysore, K. S. PY - 2013 DA - 2013// TI - Nonhost resistance against bacterial pathogens: retrospectives and prospects JO - Annu Rev Phytopathol VL - 51 UR - https://doi.org/10.1146/annurev-phyto-082712-102319 DO - 10.1146/annurev-phyto-082712-102319 ID - Senthil-Kumar2013 ER - TY - JOUR AU - Nürnberger, T. AU - Brunner, F. AU - Kemmerling, B. AU - Piater, L. PY - 2004 DA - 2004// TI - Innate immunity in plants and animals: striking similarities and obvious differences JO - Immunol Rev VL - 198 UR - https://doi.org/10.1111/j.0105-2896.2004.0119.x DO - 10.1111/j.0105-2896.2004.0119.x ID - Nürnberger2004 ER - TY - JOUR AU - Zipfel, C. AU - Felix, G. PY - 2005 DA - 2005// TI - Plants and animals: a different taste for microbes? JO - Curr Opin Plant Biol VL - 8 UR - https://doi.org/10.1016/j.pbi.2005.05.004 DO - 10.1016/j.pbi.2005.05.004 ID - Zipfel2005 ER - TY - JOUR AU - Zipfel, C. PY - 2014 DA - 2014// TI - Plant pattern-recognition receptors JO - Trends Immunol VL - 35 UR - https://doi.org/10.1016/j.it.2014.05.004 DO - 10.1016/j.it.2014.05.004 ID - Zipfel2014 ER - TY - JOUR AU - Nikonorova, N. AU - Vu, L. D. AU - Czyzewicz, N. AU - Gevaert, K. AU - Smet, I. PY - 2015 DA - 2015// TI - A phylogenetic approach to study the origin and evolution of the CRINKLY4 family JO - Front Plant Sci VL - 6 UR - https://doi.org/10.3389/fpls.2015.00880 DO - 10.3389/fpls.2015.00880 ID - Nikonorova2015 ER - TY - JOUR AU - Stahl, Y. AU - Wink, R. AU - Ingram, G. AU - Simon, R. PY - 2009 DA - 2009// TI - A signaling module controlling the stem cell niche in Arabidopsis root meristems JO - Curr Biol VL - 19 UR - https://doi.org/10.1016/j.cub.2009.03.060 DO - 10.1016/j.cub.2009.03.060 ID - Stahl2009 ER - TY - JOUR AU - Shiu, S. AU - Bleecker, A. PY - 2003 DA - 2003// TI - Expansion of the receptor-like kinase/Pelle gene family and receptor-like proteins in Arabidopsis JO - Plant Physiol VL - 132 UR - https://doi.org/10.1104/pp.103.021964 DO - 10.1104/pp.103.021964 ID - Shiu2003 ER - TY - CHAP AU - Vaid, N. AU - Pandey, P. K. AU - Tuteja, N. ED - Tuteja, N. ED - Gill, S. S. PY - 2016 DA - 2016// TI - Lectin receptor-like kinases and their emerging role in abiotic stress tolerance BT - Abiotic stress response in plants. Weinheim: Wileh-VCH ID - Vaid2016 ER - TY - JOUR AU - Choi, W. G. AU - Miller, G. AU - Wallace, I. AU - Harper, J. AU - Mittler, R. AU - Gilroy, S. PY - 2017 DA - 2017// TI - Orchestrating rapid long-distance signaling in plants with Ca2+, ROS and electrical signals JO - Plant J VL - 90 UR - https://doi.org/10.1111/tpj.13492 DO - 10.1111/tpj.13492 ID - Choi2017 ER - TY - JOUR AU - Niderman, T. AU - Genetet, I. AU - Bruyere, T. AU - Gees, R. AU - Stintzi, A. AU - Legrand, M. AU - Fritig, B. AU - Mosinger, E. PY - 1995 DA - 1995// TI - Pathogenesis-related PR-1 proteins are antifungal. Isolation and characterization of three 14-kilodalton proteins of tomato and of a basic PR-1 of tobacco with inhibitory activity against Phytophthora infestans JO - Plant Physiol VL - 108 UR - https://doi.org/10.1104/pp.108.1.17 DO - 10.1104/pp.108.1.17 ID - Niderman1995 ER - TY - JOUR AU - Loon, L. AU - Rep, M. AU - Pieterse, C. AU - Pieterse, C. PY - 2006 DA - 2006// TI - Significance of inducible defense-related proteins in infected plants JO - Annu Rev Phytopathol VL - 44 UR - https://doi.org/10.1146/annurev.phyto.44.070505.143425 DO - 10.1146/annurev.phyto.44.070505.143425 ID - Loon2006 ER - TY - JOUR AU - Gamir, J. AU - Darwiche, R. AU - Hof, P. AU - Choudhary, V. AU - Stumpe, M. AU - Schneiter, R. AU - Mauch, F. PY - 2017 DA - 2017// TI - The sterol-binding activity of PATHOGENESIS-RELATED PROTEIN 1 reveals the mode of action of an antimicrobial protein JO - Plant J VL - 89 UR - https://doi.org/10.1111/tpj.13398 DO - 10.1111/tpj.13398 ID - Gamir2017 ER - TY - JOUR AU - Choon, R. L. T. AU - Sariah, M. AU - Mariam, S. PY - 2012 DA - 2012// TI - Ergosterol from the soilborne fungus Ganoderma boninense JO - J Basic Microbiol VL - 52 UR - https://doi.org/10.1002/jobm.201100308 DO - 10.1002/jobm.201100308 ID - Choon2012 ER - TY - JOUR AU - Gao, Y. AU - Chen, T. AU - Breuil, C. PY - 1993 DA - 1993// TI - Ergosterol—a measure of fungal growth in wood for staining and pitch control fungi JO - Biotechnol Tech VL - 7 UR - https://doi.org/10.1007/BF00151858 DO - 10.1007/BF00151858 ID - Gao1993 ER - TY - JOUR AU - Muniroh, M. S. AU - Sariah, M. AU - Abidin, M. Z. AU - Lima, N. AU - Paterson, R. R. M. PY - 2014 DA - 2014// TI - Rapid detection of Ganoderma-infected oil palms by microwave ergosterol extraction with HPLC and TLC JO - J Microbiol Methods VL - 100 UR - https://doi.org/10.1016/j.mimet.2014.03.005 DO - 10.1016/j.mimet.2014.03.005 ID - Muniroh2014 ER - TY - JOUR AU - Mittler, R. AU - Vanderauwera, S. AU - Gollery, M. AU - Breusegem, F. PY - 2004 DA - 2004// TI - Reactive oxygen gene network of plants JO - Trends Plant Sci VL - 9 UR - https://doi.org/10.1016/j.tplants.2004.08.009 DO - 10.1016/j.tplants.2004.08.009 ID - Mittler2004 ER - TY - STD TI - Trchounian A, Petrosyan M, Sahakyan N. Plant cell redox homeostasis and reactive oxygen species. In: Gupta DK, Palma JM, Corpas FJ, editors. Redox state as a central regulator of plant-cell stress responses. Cham: Springer; 2016. p. 25–50. ID - ref56 ER - TY - JOUR AU - Sasaki, K. AU - Iwai, T. AU - Hiraga, S. AU - Kuroda, K. AU - Seo, S. AU - Mitsuhara, I. AU - Miyasaka, A. AU - Iwano, M. AU - Ito, H. AU - Matsui, H. AU - Ohashi, Y. PY - 2004 DA - 2004// TI - Ten rice peroxidases redundantly respond to multiple stresses including infection with rice blast fungus JO - Plant Cell Physiol VL - 5 UR - https://doi.org/10.1093/pcp/pch165 DO - 10.1093/pcp/pch165 ID - Sasaki2004 ER - TY - JOUR AU - Passardi, F. AU - Cosio, C. AU - Penel, C. AU - Dunand, C. PY - 2005 DA - 2005// TI - Peroxidases have more functions than a Swiss army knife JO - Plant Cell Rep VL - 24 UR - https://doi.org/10.1007/s00299-005-0972-6 DO - 10.1007/s00299-005-0972-6 ID - Passardi2005 ER - TY - JOUR AU - Yoshioka, H. AU - Numata, N. AU - Nakajima, K. AU - Katou, S. AU - Kawakita, K. AU - Rowland, O. AU - Jones, J. D. AU - Doke, N. PY - 2003 DA - 2003// TI - Nicotiana benthamiana gp91phox homologs NbrbohA and NbrbohB participate in H2O2 accumulation and resistance to Phytophthora infestans JO - Plant Cell VL - 15 UR - https://doi.org/10.1105/tpc.008680 DO - 10.1105/tpc.008680 ID - Yoshioka2003 ER - TY - CHAP AU - Abdullah, S. N. A. AU - Akhtar, M. S. ED - Hakeem, K. R. ED - Akhtar, M. S. ED - Abdullah, S. N. A. PY - 2016 DA - 2016// TI - Plant and necrotrophic fungal pathogen interaction: mechanism and mode of action BT - Plant, soil and microbes PB - Springer CY - Cham UR - https://doi.org/10.1007/978-3-319-27455-3_3 DO - 10.1007/978-3-319-27455-3_3 ID - Abdullah2016 ER - TY - JOUR AU - MacMillan, C. P. AU - Birke, H. AU - Chuah, A. AU - Brill, E. AU - Tsuji, Y. AU - Ralph, J. AU - Dennis, E. AU - Llewellyn, D. AU - Pettolino, F. A. PY - 2017 DA - 2017// TI - Tissue and cell-specific transcriptomes in cotton reveal the subtleties of gene regulation underlying the diversity of plant secondary cell walls JO - BMC Genomics VL - 18 UR - https://doi.org/10.1186/s12864-017-3902-4 DO - 10.1186/s12864-017-3902-4 ID - MacMillan2017 ER - TY - JOUR AU - Cosgrove, D. J. AU - Jarvis, M. C. PY - 2012 DA - 2012// TI - Comparative structure and biomechanics of plant primary and secondary cell walls JO - Front Plant Sci VL - 3 UR - https://doi.org/10.3389/fpls.2012.00204 DO - 10.3389/fpls.2012.00204 ID - Cosgrove2012 ER - TY - JOUR AU - Brown, D. AU - Zeef, L. AU - Ellis, J. AU - Goodacre, R. AU - Turner, S. R. PY - 2005 DA - 2005// TI - Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics JO - Plant Cell VL - 17 UR - https://doi.org/10.1105/tpc.105.031542 DO - 10.1105/tpc.105.031542 ID - Brown2005 ER - TY - JOUR AU - Sato, K. AU - Suzuki, R. AU - Nishikubo, N. AU - Takenouchi, S. AU - Ito, S. AU - Nakano, Y. AU - Nakaba, S. AU - Sano, Y. AU - Funada, R. AU - Kajita, S. AU - Kitano, H. PY - 2010 DA - 2010// TI - Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components JO - Planta VL - 232 UR - https://doi.org/10.1007/s00425-010-1171-4 DO - 10.1007/s00425-010-1171-4 ID - Sato2010 ER - TY - JOUR AU - Liu, L. AU - Shang-Guan, K. AU - Zhang, B. AU - Liu, X. AU - Yan, M. AU - Zhang, L. AU - Shi, Y. AU - Zhang, M. AU - Qian, Q. AU - Li, J. AU - Zhou, Y. PY - 2013 DA - 2013// TI - Brittle Culm1, a COBRA-like protein, functions in cellulose assembly through binding cellulose microfibrils JO - PLoS Genet VL - 9 UR - https://doi.org/10.1371/journal.pgen.1003704 DO - 10.1371/journal.pgen.1003704 ID - Liu2013 ER - TY - JOUR AU - Marowa, P. AU - Ding, A. AU - Kong, Y. PY - 2016 DA - 2016// TI - Expansins: roles in plant growth and potential applications in crop improvement JO - Plant Cell Rep VL - 35 UR - https://doi.org/10.1007/s00299-016-1948-4 DO - 10.1007/s00299-016-1948-4 ID - Marowa2016 ER - TY - JOUR AU - Jones, L. AU - McQueen-Mason, S. PY - 2004 DA - 2004// TI - A role for expansins in dehydration and rehydration of the resurrection plant Craterostigma Plantagineum JO - FEBS Lett VL - 559 UR - https://doi.org/10.1016/S0014-5793(04)00023-7 DO - 10.1016/S0014-5793(04)00023-7 ID - Jones2004 ER - TY - JOUR AU - Guo, W. AU - Zhao, J. AU - Li, X. AU - Qin, L. AU - Yan, X. AU - Liao, H. PY - 2011 DA - 2011// TI - A soybean β-expansin gene GmEXPB2 intrinsically involved in root system architecture responses to abiotic stresses JO - Plant J VL - 66 UR - https://doi.org/10.1111/j.1365-313X.2011.04511.x DO - 10.1111/j.1365-313X.2011.04511.x ID - Guo2011 ER - TY - JOUR AU - Li, F. AU - Han, Y. AU - Feng, Y. AU - Xing, S. AU - Zhao, M. AU - Chen, Y. AU - Wang, W. PY - 2013 DA - 2013// TI - Expression of wheat expansin driven by the RD29 promoter in tobacco confers water-stress tolerance without impacting growth and development JO - J Biotechnol VL - 163 UR - https://doi.org/10.1016/j.jbiotec.2012.11.008 DO - 10.1016/j.jbiotec.2012.11.008 ID - Li2013 ER - TY - JOUR AU - Nanjo, Y. AU - Nakamura, T. AU - Komatsu, S. PY - 2013 DA - 2013// TI - Identification of indicator proteins associated with flooding injury in soybean seedlings using label-free quantitative proteomics JO - J Proteome Res VL - 12 UR - https://doi.org/10.1021/pr4002349 DO - 10.1021/pr4002349 ID - Nanjo2013 ER - TY - JOUR AU - Abuqamar, S. AU - Ajeb, S. AU - Sham, A. AU - Enan, M. R. AU - Iratni, R. PY - 2013 DA - 2013// TI - A mutation in the expansin-like A2 gene enhances resistance to necrotrophic fungi and hypersensitivity to abiotic stress in Arabidopsis thaliana JO - Mol Plant Pathol VL - 14 UR - https://doi.org/10.1111/mpp.12049 DO - 10.1111/mpp.12049 ID - Abuqamar2013 ER - TY - JOUR AU - Cosgrove, D. J. PY - 2015 DA - 2015// TI - Plant expansins: diversity and interactions with plant cell walls JO - Curr Opin Plant Biol VL - 25 UR - https://doi.org/10.1016/j.pbi.2015.05.014 DO - 10.1016/j.pbi.2015.05.014 ID - Cosgrove2015 ER - TY - JOUR AU - Li, H. AU - Child, M. AU - Bogyo, M. PY - 2012 DA - 2012// TI - Proteases as regulators of pathogenesis: examples from the Apicomplexa JO - Biochim Biophys Acta VL - 1824 UR - https://doi.org/10.1016/j.bbapap.2011.06.002 DO - 10.1016/j.bbapap.2011.06.002 ID - Li2012 ER - TY - STD TI - Seow-Neng C, Bakar NA, Mahmood M, Chai-Ling H, Shaharuddin NA. Alternative strategy in crop protection: protease inhibitors from turmeric. In: Abdullah SNA, Ho CL, Wagstaff C. crop improvement: Cham: Springer International Publishing; 2017. p. 253–70. ID - ref74 ER - TY - STD TI - Rustgi S, Boex-Fontvieille E, Reinbothe C, von Wettstein D, Reinbothe S. Serpin1 and WSCP differentially regulate the activity of the cysteine protease RD21 during plant development in Arabidopsis thaliana. Proc Natl Acad Sci U S A. 2017;201621496. ID - ref75 ER - TY - JOUR AU - Petrov, V. AU - Hille, J. AU - Mueller-Roeber, B. AU - Gechev, T. PY - 2015 DA - 2015// TI - ROS-mediated abiotic stress-induced programmed cell death in plants JO - Front Plant Sci VL - 6 UR - https://doi.org/10.3389/fpls.2015.00069 DO - 10.3389/fpls.2015.00069 ID - Petrov2015 ER - TY - JOUR AU - Dutt, S. AU - Gaur, V. AU - Taj, G. AU - Kumar, A. PY - 2012 DA - 2012// TI - Differential induction of two different cystatin genes during pathogenesis of Karnal bunt (Tilletia indica) in wheat under the influence of jasmonic acid JO - Gene VL - 506 UR - https://doi.org/10.1016/j.gene.2012.06.028 DO - 10.1016/j.gene.2012.06.028 ID - Dutt2012 ER - TY - JOUR AU - Hartl, M. AU - Giri, A. P. AU - Kaur, H. AU - Baldwin, I. T. PY - 2011 DA - 2011// TI - The multiple functions of plant serine protease inhibitors: defense against herbivores and beyond JO - Plant Signal Behav VL - 6 UR - https://doi.org/10.4161/psb.6.7.15504 DO - 10.4161/psb.6.7.15504 ID - Hartl2011 ER - TY - JOUR AU - Bode, R. F. AU - Halitschke, R. AU - Kessler, A. PY - 2013 DA - 2013// TI - Herbivore damage-induced production and specific anti-digestive function of serine and cysteine protease inhibitors in tall goldenrod, Solidago altissima L. (Asteraceae) JO - Planta VL - 237 UR - https://doi.org/10.1007/s00425-013-1845-9 DO - 10.1007/s00425-013-1845-9 ID - Bode2013 ER - TY - JOUR AU - Müller, V. AU - Bonacci, G. AU - Batthyany, C. AU - Amé, M. V. AU - Carrari, F. AU - Gieco, J. AU - Asis, R. PY - 2017 DA - 2017// TI - Peanut seed cultivars with contrasting resistance to Aspergillus parasiticus colonization display differential temporal response of protease inhibitors JO - Phytopathology VL - 107 UR - https://doi.org/10.1094/PHYTO-09-16-0346-R DO - 10.1094/PHYTO-09-16-0346-R ID - Müller2017 ER - TY - JOUR AU - Bangrak, P. AU - Chotigeat, W. PY - 2011 DA - 2011// TI - Molecular cloning and biochemical characterization of a novel cystatin from Hevea rubber latex JO - Plant Physiol Biochem VL - 49 UR - https://doi.org/10.1016/j.plaphy.2010.12.007 DO - 10.1016/j.plaphy.2010.12.007 ID - Bangrak2011 ER - TY - JOUR AU - Zhang, Y. AU - Lubberstedt, T. AU - Xu, M. PY - 2013 DA - 2013// TI - The genetic and molecular basis of plant resistance to pathogens JO - J Genet Genomics VL - 40 UR - https://doi.org/10.1016/j.jgg.2012.11.003 DO - 10.1016/j.jgg.2012.11.003 ID - Zhang2013 ER - TY - JOUR AU - Habib, H. AU - Fazili, K. PY - 2007 DA - 2007// TI - Plant protease inhibitors: a defense strategy in plants JO - Biotechnol Mol Biol Rev VL - 2 ID - Habib2007 ER - TY - JOUR AU - Dunse, K. M. AU - Stevens, J. A. AU - Lay, F. T. AU - Gaspar, Y. M. AU - Heath, R. L. AU - Anderson, M. A. PY - 2010 DA - 2010// TI - Coexpression of potato type I and II proteinase inhibitors gives cotton plants protection against insect damage in the field JO - Proc Natl Acad Sci VL - 107 UR - https://doi.org/10.1073/pnas.1009241107 DO - 10.1073/pnas.1009241107 ID - Dunse2010 ER - TY - JOUR AU - Lee, D. S. AU - Kim, B. K. AU - Kwon, S. J. AU - Jin, H. C. AU - Park, O. K. PY - 2009 DA - 2009// TI - Arabidopsis GDSL lipase 2 plays a role in pathogen defense via negative regulation of auxin signaling JO - Biochem Biophys Res Commun VL - 379 UR - https://doi.org/10.1016/j.bbrc.2009.01.006 DO - 10.1016/j.bbrc.2009.01.006 ID - Lee2009 ER - TY - JOUR AU - Gao, M. AU - Yin, X. AU - Yang, W. AU - Lam, S. M. AU - Tong, X. AU - Liu, J. AU - Wang, X. AU - Li, Q. AU - Shui, G. AU - He, Z. PY - 2017 DA - 2017// TI - GDSL lipases modulate immunity through lipid homeostasis in rice JO - PLoS Pathog VL - 13 UR - https://doi.org/10.1371/journal.ppat.1006724 DO - 10.1371/journal.ppat.1006724 ID - Gao2017 ER - TY - JOUR AU - Christensen, L. P. PY - 2009 DA - 2009// TI - Galactolipids as potential health promoting compounds in vegetable foods JO - Recent Pat Food Nutr Agric VL - 1 UR - https://doi.org/10.2174/2212798410901010050 DO - 10.2174/2212798410901010050 ID - Christensen2009 ER - TY - JOUR AU - Gao, Q. M. AU - Yu, K. AU - Xia, Y. AU - Shine, M. B. AU - Wang, C. AU - Navarre, D. AU - Kachroo, A. AU - Kachroo, P. PY - 2014 DA - 2014// TI - Mono-and digalactosyldiacylglycerol lipids function nonredundantly to regulate systemic acquired resistance in plants JO - Cell Rep VL - 9 UR - https://doi.org/10.1016/j.celrep.2014.10.069 DO - 10.1016/j.celrep.2014.10.069 ID - Gao2014 ER - TY - JOUR AU - Ferrari, S. AU - Galletti, R. AU - Pontiggia, D. AU - Manfredini, C. AU - Lionetti, V. AU - Bellincampi, D. AU - Cervone, F. AU - DeLorenzo, G. PY - 2008 DA - 2008// TI - Transgenic expression of a fungal endo-polygalacturonase increases plant resistance to pathogens and reduces auxin sensitivity JO - Plant Physiol VL - 146 UR - https://doi.org/10.1104/pp.107.109686 DO - 10.1104/pp.107.109686 ID - Ferrari2008 ER - TY - JOUR AU - Savatin, D. V. AU - Ferrari, S. AU - Sicilia, F. AU - Lorenzo, G. PY - 2011 DA - 2011// TI - Oligogalacturonide-auxin antagonism does not require posttranscriptional gene silencing or stabilization of auxin response repressors in Arabidopsis JO - Plant Physiol VL - 157 UR - https://doi.org/10.1104/pp.111.184663 DO - 10.1104/pp.111.184663 ID - Savatin2011 ER - TY - JOUR AU - Lee, S. H. PY - 2006 DA - 2006// TI - Cho HT. PINOID positively regulates auxin efflux in Arabidopsis root hair cells and tobacco cells JO - Plant Cell VL - 18 UR - https://doi.org/10.1105/tpc.105.035972 DO - 10.1105/tpc.105.035972 ID - Lee2006 ER - TY - JOUR AU - Wang, H. AU - Lin, J. AU - Chang, Y. AU - Jiang, C. PY - 2017 DA - 2017// TI - Comparative transcriptomic analysis reveals that ethylene/H2O2-mediated hypersensitive response and programmed cell death determine the compatible interaction of sand pear and Alternaria alternata JO - Front Plant Sci VL - 8 ID - Wang2017 ER - TY - JOUR AU - Zhao, Y. AU - Chang, X. AU - Qi, D. AU - Dong, L. AU - Wang, G. AU - Fan, S. AU - Jiang, L. AU - Cheng, Q. AU - Chen, X. AU - Han, D. AU - Xu, P. PY - 2017 DA - 2017// TI - A novel soybean ERF transcription factor, GmERF113, increases resistance to Phytophthora sojae infection in soybean JO - Front Plant Sci VL - 8 ID - Zhao2017 ER - TY - JOUR AU - Asahina, M. AU - Azuma, K. AU - Pitaksaringkarn, W. AU - Yamazaki, T. AU - Mitsuda, N. AU - Ohme-Takagi, M. AU - Yamaguchi, S. AU - Kamiya, Y. AU - Okada, K. AU - Nishimura, T. AU - Koshiba, T. PY - 2011 DA - 2011// TI - Spatially selective hormonal control of RAP2. 6L and ANAC071 transcription factors involved in tissue Reunion in Arabidopsis JO - Proc Natl Acad Sci U S A VL - 108 UR - https://doi.org/10.1073/pnas.1110443108 DO - 10.1073/pnas.1110443108 ID - Asahina2011 ER - TY - JOUR AU - Yan, J. AU - Zhang, C. AU - Gu, M. AU - Bai, Z. AU - Zhang, W. AU - Qi, T. PY - 2009 DA - 2009// TI - The Arabidopsis CORONATINE INSENSITIVE1 protein is a jasmonate receptor JO - Plant Cell VL - 21 UR - https://doi.org/10.1105/tpc.109.065730 DO - 10.1105/tpc.109.065730 ID - Yan2009 ER - TY - JOUR AU - Zhu, Z. AU - An, F. AU - Feng, Y. AU - Li, P. AU - Xue, L. AU - Mu, A. PY - 2011 DA - 2011// TI - Derepression of ethylene-stabilized transcription factors (EIN3/EIL1) mediates jasmonate and ethylene signaling synergy in Arabidopsis JO - Proc Natl Acad Sci U S A VL - 108 UR - https://doi.org/10.1073/pnas.1103959108 DO - 10.1073/pnas.1103959108 ID - Zhu2011 ER - TY - JOUR AU - Schweizer, F. AU - Fernández-Calvo, P. AU - Zander, M. AU - Diez-Diaz, M. AU - Fonseca, S. AU - Glauser, G. AU - Lewsey, M. G. AU - Ecker, J. R. AU - Solano, R. AU - Reymond, P. PY - 2013 DA - 2013// TI - Arabidopsis basic helix-loop-helix transcription factors MYC2, MYC3, and MYC4 regulate glucosinolate biosynthesis, insect performance, and feeding behavior JO - Plant Cell VL - 25 UR - https://doi.org/10.1105/tpc.113.115139 DO - 10.1105/tpc.113.115139 ID - Schweizer2013 ER - TY - JOUR AU - Fernández-Calvo, P. AU - Chini, A. AU - Fernández-Barbero, G. AU - Chico, C. AU - Gimenez-Ibanez, S. AU - Geerinck, J. AU - Eeckhout, D. AU - Schweizer, F. AU - Godoy, M. AU - Franco-Zorrilla, J. M. AU - Pauwels, L. PY - 2011 DA - 2011// TI - The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses JO - Plant Cell VL - 23 UR - https://doi.org/10.1105/tpc.110.080788 DO - 10.1105/tpc.110.080788 ID - Fernández-Calvo2011 ER - TY - JOUR AU - Kazan, K. AU - Manners, J. M. PY - 2013 DA - 2013// TI - MYC2: the master in action JO - Mol Plant VL - 6 UR - https://doi.org/10.1093/mp/sss128 DO - 10.1093/mp/sss128 ID - Kazan2013 ER - TY - JOUR AU - Gasperini, D. AU - Chételat, A. AU - Acosta, I. AU - Goossens, J. AU - Pauwels, L. AU - Goossens, A. AU - Dreos, R. AU - Alfonso, E. AU - Farmer, E. E. PY - 2015 DA - 2015// TI - Multilayered organization of jasmonate signalling in the regulation of root growth JO - PLoS Genet VL - 11 UR - https://doi.org/10.1371/journal.pgen.1005300 DO - 10.1371/journal.pgen.1005300 ID - Gasperini2015 ER - TY - JOUR AU - Jakoby, M. AU - Wang, H. Y. AU - Reidt, W. AU - Weisshaar, B. AU - Bauer, P. PY - 2004 DA - 2004// TI - FRU (BHLH029) is required for induction of iron mobilization genes in Arabidopsis thaliana JO - FEBS Lett VL - 577 UR - https://doi.org/10.1016/j.febslet.2004.10.062 DO - 10.1016/j.febslet.2004.10.062 ID - Jakoby2004 ER - TY - JOUR AU - Rossi, F. R. AU - Krapp, A. R. AU - Bisaro, F. AU - Maiale, S. J. AU - Pieckenstain, F. L. AU - Carrillo, N. PY - 2017 DA - 2017// TI - Reactive oxygen species generated in chloroplasts contribute to tobacco leaf infection by the necrotrophic fungus Botrytis cinerea JO - Plant J VL - 92 UR - https://doi.org/10.1111/tpj.13718 DO - 10.1111/tpj.13718 ID - Rossi2017 ER - TY - JOUR AU - Lorenzo, O. AU - Piqueras, R. AU - Sánchez-Serrano, J. J. AU - Solano, R. PY - 2003 DA - 2003// TI - ETHYLENE RESPONSE FACTOR1 integrates signals from ethylene and jasmonate pathways in plant defense JO - Plant Cell VL - 15 UR - https://doi.org/10.1105/tpc.007468 DO - 10.1105/tpc.007468 ID - Lorenzo2003 ER - TY - JOUR AU - McGrath, K. C. AU - Dombrecht, B. AU - Manners, J. M. AU - Schenk, P. M. AU - Edgar, C. I. AU - Maclean, D. J. AU - Scheible, W. R. AU - Udvardi, M. K. AU - Kazan, K. PY - 2005 DA - 2005// TI - Repressor-and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression JO - Plant Physiol VL - 139 UR - https://doi.org/10.1104/pp.105.068544 DO - 10.1104/pp.105.068544 ID - McGrath2005 ER - TY - JOUR AU - Khan, N. A. AU - Khan, M. I. R. AU - Ferrante, A. AU - Poor, P. PY - 2017 DA - 2017// TI - Ethylene: a key regulatory molecule in plants JO - Front Plant Sci VL - 8 UR - https://doi.org/10.3389/fpls.2017.01782 DO - 10.3389/fpls.2017.01782 ID - Khan2017 ER - TY - JOUR AU - Idris, A. S. AU - Kushairi, D. AU - Ariffin, D. AU - Basri, M. W. PY - 2006 DA - 2006// TI - Technique for inoculation of oil palm germinated seeds with Ganoderma JO - MPOB Inf Ser VL - 314 ID - Idris2006 ER - TY - JOUR AU - Sundram, S. AU - Meon, S. AU - Seman, I. A. AU - Othman, R. PY - 2011 DA - 2011// TI - Symbiotic interaction of endophytic bacteria with arbuscular mycorrhizal fungi and its antagonistic effect on Ganoderma boninense JO - J Microbiol VL - 49 UR - https://doi.org/10.1007/s12275-011-0489-3 DO - 10.1007/s12275-011-0489-3 ID - Sundram2011 ER - TY - JOUR AU - Prescott, A. AU - Martin, C. PY - 1986 DA - 1986// TI - A rapid method for the quantitative assessment of levels of specific mRNAs in plants JO - Plant Mol Biol Report VL - 4 UR - https://doi.org/10.1007/BF02675414 DO - 10.1007/BF02675414 ID - Prescott1986 ER - TY - JOUR AU - Conesa, A. AU - Götz, S. AU - García-Gómez, J. AU - Terol, J. PY - 2005 DA - 2005// TI - Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research JO - Bioinformatics VL - 21 UR - https://doi.org/10.1093/bioinformatics/bti610 DO - 10.1093/bioinformatics/bti610 ID - Conesa2005 ER - TY - JOUR AU - Vandesompele, J. AU - Preter, K. AU - Pattyn, F. AU - Poppe, B. AU - Roy, N. AU - Paepe, A. AU - Speleman, F. PY - 2002 DA - 2002// TI - Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes JO - Genome Biol VL - 3 UR - https://doi.org/10.1186/gb-2002-3-7-research0034 DO - 10.1186/gb-2002-3-7-research0034 ID - Vandesompele2002 ER - TY - JOUR AU - Kwan, Y. M. AU - Meon, S. AU - Ho, C. L. AU - Wong, M. Y. PY - 2016 DA - 2016// TI - Selection of reference genes for quantitative real-time PCR normalization in Ganoderma-infected oil palm (Elaeis guineensis) seedlings JO - Australasian Plant Path VL - 45 UR - https://doi.org/10.1007/s13313-016-0417-4 DO - 10.1007/s13313-016-0417-4 ID - Kwan2016 ER - TY - JOUR AU - Bustin, S. A. AU - Benes, V. AU - Garson, J. A. AU - Hellemans, J. AU - Huggett, J. AU - Kubista, M. AU - Mueller, R. AU - Nolan, T. AU - Pfaffl, M. W. AU - Shipley, G. L. AU - Vandesompele, J. PY - 2009 DA - 2009// TI - The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments JO - Clin Chem VL - 55 UR - https://doi.org/10.1373/clinchem.2008.112797 DO - 10.1373/clinchem.2008.112797 ID - Bustin2009 ER -