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Table 4: Genotyping errors detected in F1 individuals after Sequenom MassARRAY genotyping

From: Genetic identification of SNP markers linked to a new grape phylloxera resistant locus in Vitis cinerea for marker-assisted selection

F1 Individual ID

SNP ID

Sequenom MassARRAY

TASSEL GBS Pipeline

k2b_16_06_6_6c

S14_9705369

CT

TT

k2b_16_08_6_6c

S14_9705369

CT

TT

k2b_16_11_5_6c

S14_9705369

CT

TT

k2b_16_13_2_6c

S14_2846470

CT

CC

S14_5274160

CT

TT

S14_6175917

CT

TT

S14_9705369

CT

TT

k2b_16_13_7_6c

S14_7684469

AG

AA

k2b_16_15_1_6c

S14_4196799

AA

GA

S14_7684469

AA

GA

S14_9154944

TT

GT