From: QTL mapping of melon fruit quality traits using a high-density GBS-based genetic map
Trait | QTL ID | LOD | R2 | Additive effecta | Chr | Genetic position (cM) | Physical positionb (pb) | Flanking marker 1 respect 1-LOD CI | Flanking marker 2 respect to 1-LOD CI | LOD T1c | LOD T2c | LOD T3c | LOD T4c | LOD T5c |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SSC | SSCQU8.1 | 9.96 | 40.3 | −1.26 | 8 | 86.49 | 9,634,968 | chr08_9446475 | chr08_17287431 | 6.3 | 8.0 | 2.7 | 5.8 | 4.4 |
SSCQU8.2 | 9.83 | 39.9 | −1.27 | 8 | 90.28 | 2,446,682 | chr08_21787907 | chr08_25723466 | 5.7 | 8.9 | 3.0 | 5.9 | 4.7 | |
SSCQU8.3 | 10.76 | 42.7 | −1.3 | 8 | 102.66 | 29,813,774 | chr08_29419309 | chr08_31888799 | 8.2 | 6.2 | 3.8 | 6.9 | 5.9 | |
SSCQU9.1 | 2.78 | 13.4 | 0.711 | 9 | 33.49 | 3,446,851 | chr09_2403873 | chr09_6139775 | 1.6 | 4.1 | 1.4 | 2.7 | 2.5 | |
SSCQU9.2 | 2.57 | 12.5 | 0.69 | 9 | 49.89 | 18,822,601 | chr09_12354052 | chr09_20679607 | 0.8 | 4.6 | 1.5 | 2.5 | 2.7 | |
SSCQU10.1 | 3.3 | 15.7 | 0.77 | 10 | 18.06 | 1,448,864 | chr10_290494 | chr10_1736076 | 1.5 | 2.8 | 1.5 | 2.6 | 2.6 | |
FW | FWQU5.1 | 6.42 | 28.3 | 153.27 | 5 | 40.51 | 2,516,188 | chr05_2356255 | chr05_2852011 | 6.7 | 2.1 | 2.3 | 3.0 | 2.2 |
FWQU8.1 | 2.51 | 12.2 | −92.38 | 8 | 31.73 | 3,794,839 | chr08_2692759 | chr08_4296991 | 0.8 | 0.3 | 1.7 | 2.5 | 2.8 | |
FD | FDQU2.1 | 3.29 | 15.6 | 0.47 | 2 | 88.58 | 19,149,034 | chr02_16082886 | chr02_23479910 | 1.4 | 1.4 | 1.7 | 3.2 | 2.4 |
FDQU5.1 | 4.92 | 22.5 | 0.6 | 5 | 41.22 | 2,516,188 | chr05_2356255 | chr05_2852011 | 5.5 | 1.8 | 2.3 | 2.0 | 1.5 | |
FS | FSQU2.1 | 2.96 | 14.2 | −0.061 | 2 | 30.07 | 2,291,502 | chr02_1078625 | chr02_2336060 | 2.6 | 3.0 | 2.4 | 3.6 | 0.1 |
FSQU2.2 | 3.18 | 15.2 | −0.064 | 2 | 75.52 | 15,813,424 | chr02_15771889 | chr02_16082886 | 4.5 | 2.0 | 0.3 | 1.5 | 1.4 | |
FSQU6.1 | 7.7 | 32.9 | −0.092 | 6 | 99.72 | 27,462,954 | chr06_20798398 | chr06_31973799 | 4.1 | 4.9 | 6.9 | 2.5 | 5.7 | |
FSQU6.2 | 6.96 | 30.2 | −0.087 | 6 | 106.99 | 37,606,100 | chr06_31628322 | chr06_36412832 | 4.3 | 5.0 | 5.6 | 2.9 | 3.4 | |
FSQU11.1 | 3.34 | 15.9 | −0.064 | 11b | 81.68 | 31,585,050 | chr11_30961509 | chr11_32731899 | 2.1 | 2.8 | 4.8 | 2.1 | 1.1 | |
FL | FLQU5.1 | 5.29 | 24 | 1.16 | 5 | 40.51 | 2,516,188 | chr05_2120261 | chr05_2852011 | 5.1 | 2.3 | 2.0 | 3.8 | 2.9 |
FLQU6.1 | 5.78 | 25.9 | −1.1 | 6 | 100.43 | 27,462,951 | chr06_21051362 | chr06_31628322 | 3.2 | 4.5 | 3.8 | 2.5 | 4.6 | |
FLQU11.1 | 3.79 | 17.8 | −0.96 | 11b | 47.46 | 29,855,362 | chr11_29106564 | chr11_29999328 | 3.7 | 2.5 | 1.7 | 3.1 | 1.8 | |
FLQU11.2 | 2.67 | 12.9 | −0.81 | 11b | 80.68 | 31,585,050 | chr11_30961509 | chr11_32755551 | 4.7 | 2.8 | 4.4 | 0.6 | 0.2 | |
FP | FPQU5.1 | 6.73 | 29.4 | 2.95 | 5 | 40.51 | 2,516,188 | chr05_2356255 | chr05_2852011 | 7.7 | 2.8 | 2.6 | 3.2 | 2.5 |
FPQU6.1 | 2.75 | 13.3 | −1.81 | 6 | 100.43 | 27,462,951 | chr06_11412502 | chr06_36412832 | 1.5 | 3.2 | 1.6 | 1.7 | 2.0 | |
FPQU7.1 | 2.54 | 12.3 | −1.83 | 7 | 29.47 | 2,201,369 | chr07_1702059 | chr07_2701808 | 1.0 | 1.8 | 1.1 | 2.4 | 1.7 | |
FPQU11.1 | 3.27 | 15.6 | −2.03 | 11b | 42.79 | 29,394,480 | chr11_29106564 | chr11_29999328 | 3.5 | 2.7 | 1.1 | 3.0 | 1.1 | |
YELL | YELLQU5.1 | 3.15 | 15.1 | −0.15 | 5 | 125.12 | 29,117,405 | chr05_28951742 | chr05_29246933 | 3.8 | 2.8 | 1.4 | 2.5 | 1.9 |
YELLQU10.1 | 8.79 | 36.6 | −0.25 | 10 | 34.07 | 3,356,770 | chr10_3152004 | chr10_4144573 | 8.1 | 5.9 | 4.2 | 6.6 | 6.7 | |
YELLQU12.1 | 2.96 | 14.2 | 0.15 | 12 | 11.21 | 1,137,460 | chr12_748772 | chr12_1347790 | 1.7 | 1.6 | 1.4 | 2.8 | 2.4 | |
ECOL | ECOLQU3.1 | 3.49 | 16.5 | 0.21 | 3 | 113.40 | 29,722,370 | chr03_29257789 | chr03_30733854 | 3.5 d | 3.0 d | |||
CAR | CARQU9.1 | 16.82 | 58.5 | 5.6 | 9 | 64.32 | 21,685,526 | chr09_21387823 | chr09_21754707 | 12.7 | 11.6 | 13.6 | – | – |
SN | SNQU5.1 | 2.73 | 13.2 | 33.43 | 5 | 14.46 | 1,225,236 | chr05_729528 | chr05_1359330 | 2.1 | 0.5 | 0.3 | 2.1 | 0.4 |
SW | SWQU3.1 | 4.11 | 19.2 | 2.7 | 3 | 122.11 | 31,385,347 | chr03_30962715 | chr03_31386360 | 2.4 | 1.6 | 0.3 | 2.7 | 1.7 |
SWQU5.1 | 4.3 | 19.9 | 2.9 | 5 | 87.63 | 24,945,625 | chr05_24663285 | chr05_25326402 | 3.0 | 2.6 | 3.2 | 2.4 | 1.2 | |
SWQU7.1 | 2.91 | 14.0 | −2.2 | 7 | 0.78 | 349,611 | chr07_141549 | chr07_654924 | 0.9 | 1.4 | 1.5 | 0.9 | 2.0 | |
SWQU8.1 | 4.29 | 19.9 | −2.7 | 8 | 43.35 | 4,989,794 | chr08_4672912 | chr08_5308195 | 0.9 | 6.9 | 1.9 | 3.1 | 1.2 |