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Table 2 Duplicated GSK gene pairs identified in G. hirsutum, G. arboreum, and G. raimondii

From: Genome-wide characterization and phylogenetic analysis of GSK gene family in three species of cotton: evidence for a role of some GSKs in fiber development and responses to stress

  Duplicates
Clade Gene ID Gene name Position Gene ID Gene name Position
II Ga09G0899 GaSK22 Ga09: 59971361–59,974,663    Ga09: 59971879–59,974,663
II Ga09G0899 GaSK22 Ga09: 59971361–59,974,663    Ga09: 59989139–59,991,790
II Ga09G0899 GaSK22 Ga09: 59971361–59,974,663    Ga06: 130211141–130,213,614
II Ga09G0900 GaSK23 Ga09: 59988594–59,991,790    Ga09: 59989139–59,991,790
II Ga09G0900 GaSK23 Ga09: 59988594–59,991,790    Ga09: 59971879–59,974,663
II Ga09G0900 GaSK23 Ga09: 59988594–59,991,790    Ga06: 130211141–130,213,614
IV Ga02G1328 GaSK41 Ga02:91572951–91,576,357    Ga12: 98906373–98,909,799
II Ga06G2433 GaSK21 Ga06:130210718–130,213,627    Ga09: 59989139–59,991,777
II Ga06G2433 GaSK21 Ga06:130210718–130,213,627    Ga09: 59971879–59,974,650
IV Ga12G2665 GaSK42 Ga12:98904726–98,909,799    Ga02: 91572950–91,576,342
II Gorai.010G241600.3 GrSK21 Gr10: 61087060–61,090,705    Gr10: 61087549–61,090,443
II Gorai.010G241600.2 GrSK21–1 Gr10: 61085419–61,090,069    Gr10: 61087549–61,090,014
III Gorai.004G042400.1 GrSK31 Gr04: 3659148–3,665,477    Gr04: 3659643–3,665,066
III Gorai.004G156700.2 GrSK33 Gr04: 44445510–44,453,846    Gr04: 44449136–44,452,709
III Gorai.007G096100.1 GrSK32 Gr07: 7076952–7,083,244    Gr07: 7077235–7,082,655
I Gorai.007G308500.3 GrSK11–1 Gr07: 52192786–52,196,322    Gr07: 52193148–52,195,963
I Gorai.007G308500.1 GrSK11 Gr07: 52192786–52,197,103    Gr07: 52193148–52,195,963
IV Gorai.002G218100.1 GrSK41 Gr02: 56980865–56,985,951    Gr02: 56982189–56,985,586
IV Gorai.002G218100.1 GrSK41 Gr02: 56980865–56,985,951    Gr08: 6199127–6,202,516
IV Gorai.008G045800.2 GrSK42–2 Gr08: 6198649–6,203,828    Gr02: 56982189–56,985,579
IV Gorai.008G045800.2 GrSK42–2 Gr08: 6198649–6,203,828    Gr08: 6199120–6,202,516
IV Gorai.008G045800.3 GrSK42–1 Gr08: 6198649–6,203,828    Gr02: 56982189–56,985,579
IV Gorai.008G045800.3 GrSK42–1 Gr08: 6198649–6,203,828    Gr08: 6199120–6,202,516
IV Gorai.008G045800.6 GrSK42 Gr08: 6198704–6,203,828    Gr02: 56982189–56,985,579
IV Gorai.008G045800.6 GrSK42 Gr08: 6198704–6,203,828    Gr08: 6199120–6,202,516
I Gorai.008G136600.1 GrSK12 Gr08: 38585110–38,589,107    Gr08: 38585874–38,588,662
II Gorai.006G089300.1 GrSK22 Gr06: 32530678–32,535,037    Gr06: 32531407–32,534,186
II Gorai.006G089300.1 GrSK22 Gr06: 32530678–32,535,037    Gr06: 32547582–32,550,218
II Gorai.006G089300.2 GrSK22–1 Gr06: 32530521–32,535,037    Gr06: 32531410–32,534,186
II Gorai.006G089300.2 GrSK22–1 Gr06: 32530521–32,535,037    Gr06: 32547583–32,550,218
II Gorai.006G089400.1 GrSK23 Gr06: 32546669–32,551,023    Gr06: 32531410–32,534,186
II Gorai.006G089400.1 GrSK23 Gr06: 32546669–32,551,023    Gr10: 61087562–61,089,975
IV Gh_A12G0411 GhSK44 A12: 8244999–8,248,430 Gh_D01G1809 GhSK42 D14: 55472542–55,475,929
IV Gh_A12G0411 GhSK44 A12: 8244999–8,248,430 Gh_A01G1558 GhSK41 A01: 92410496–92,413,866
IV Gh_A12G0411 GhSK44 A12: 8244999–8,248,430 Gh_D12G0407 GhSK43 D25: 6533936–6,537,332
II Gh_D06G2142 GhSK21 D19: 63261021–63,263,915 Gh_A06G2020 GhSK26 Scaf1340_A06: 43051–45,948
I Gh_D11G2830 GhSK11 D24: 58071261–58,074,075 Gh_A11G3270 GhSK12 Scaf3045_A11: 160891–163,705
III Gh_A08G0285 GhSK31 A08: 3329052–3,334,479 Gh_D08G0378 GhSK36 D21: 3871235–3,880,133
IV Gh_D12G0407 GhSK43 D25: 6533937–6,537,332 Gh_D01G1809 GhSK42 D14: 55472542–55,475,929
IV Gh_D12G0407 GhSK43 D25: 6533937–6,537,332 Gh_A01G1558 GhSK41 A01: 92410496–92,413,866
IV Gh_D12G0407 GhSK43 D25: 6533937–6,537,332 Gh_A12G0411 GhSK44 A12: 8244998–8,248,430
III Gh_D08G0378 GhSK36 D21: 3871236–3,880,133 Gh_A08G0285 GhSK31 A08: 3329051–3,334,479
I Gh_D12G1230 GhSK14 D25: 40170076–40,172,846 Gh_A12G1106 GhSK13 A12: 64114145–64,116,909
IV Gh_D01G1809 GhSK42 D14: 55472543–55,475,936 Gh_A01G1558 GhSK41 A01: 92410496–92,413,873
IV Gh_D01G1809 GhSK42 D14: 55472543–55,475,936 Gh_D12G0407 GhSK43 D25: 6533943–6,537,332
II Gh_A09G0712 GhSK25 A09: 52841598–52,844,894    A09: 52842113–52,844,894
II Gh_A09G0712 GhSK25 A09: 52841598–52,844,894 Gh_A09G0713 GhSK24 A09: 52861923–52,864,569
II Gh_A09G0712 GhSK25 A09: 52841598–52,844,894 Gh_D09G2469 GhSK22 Scaf4332_D22: 137948–140,717
II Gh_A09G0712 GhSK25 A09: 52841598–52,844,894 Gh_D09G2468 GhSK23 Scaf4332_D22: 123123–125,754
II Gh_A09G0713 GhSK24 A09: 52861382–52,864,569    A09: 52842113–52,844,894
II Gh_A09G0713 GhSK24 A09: 52861382–52,864,569    A09: 52861923–52,864,569
II Gh_A09G0713 GhSK24 A09: 52861382–52,864,569 Gh_D09G2469 GhSK22 Scaf4332_D22: 137948–140,717
II Gh_A09G0713 GhSK24 A09: 52861382–52,864,569 Gh_D09G2468 GhSK23 Scaf4332_D22: 123123–125,754
III Gh_D11G0907 GhSK33 D24: 7839230–7,844,650 Gh_A11G0778 GhSK35 A11: 7649122–7,654,545
III Gh_A08G1158 GhSK34 A08: 81021333–81,025,764 Gh_D08G1440 GhSK32 D21: 47361119–47,366,590
IV Gh_A01G1558 GhSK41 A01: 92410497–92,413,873 Gh_D01G1809 GhSK42 D14: 55472542–55,475,936
IV Gh_A01G1558 GhSK41 A01: 92410497–92,413,873 Gh_D12G0407 GhSK43 D25: 6533943–6,537,332
III Gh_A11G0778 GhSK35 A11: 7649123–7,654,545 Gh_D11G0907 GhSK33 D24: 7839229–7,844,650
III Gh_D08G1440 GhSK32 D21: 47361120–47,366,590 Gh_A08G1158 GhSK34 A08: 81021332–81,025,764
I Gh_A12G1106 GhSK13 A12: 64114146–64,116,909 Gh_D12G1230 GhSK14 D25: 40170075–40,172,846
II Gh_A06G2020 GhSK26 Scaf1340_A06: 43052–45,877 Gh_D06G2142 GhSK21 D19: 63261091–63,263,915
I Gh_A11G3270 GhSK12 Scaf3045_A11: 160892–163,705 Gh_D11G2830 GhSK11 D24: 58071260–58,074,075
II Gh_D09G2468 GhSK23 Scaf4332_D22: 123124–126,295    A09: 52861923–52,864,569
II Gh_D09G2468 GhSK23 Scaf4332_D22: 123124–126,295    A09: 52842113–52,844,894
II Gh_D09G2468 GhSK23 Scaf4332_D22: 123124–126,295 Gh_D09G2469 GhSK22 Scaf4332_D22: 137948–140,717
II Gh_D09G2469 GhSK22 Scaf4332_D22: 137949–141,233    A09: 52861923–52,864,569
II Gh_D09G2469 GhSK22 Scaf4332_D22: 137949–141,233    A09: 52842113–52,844,894
II Gh_D09G2469 GhSK22 Scaf4332_D22: 137949–141,233 Gh_D09G2468 GhSK23 Scaf4332_D22: 123123–125,754