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Table 6 A subset of associated loci and candidate genes identified for common rust resistance according to gene annotation

From: Combined linkage and association mapping reveal QTL for host plant resistance to common rust (Puccinia sorghi) in tropical maize

Chr.

Position (bp)a

Candidate genes

Description

1

192,154,274

AC197246.3_FG001b

Ras-related protein ARA-4, small GTPase mediated signal transduction

5

10,055,423

GRMZM2G181002b, GRMZM5G829476b

Phosphotransferases. Serine or threonine-specific kinase subfamily

6

111,526,964

GRMZM2G156712b

FMN binding, kinase-associated protein, essential for defense against pathogens

8

72,047,084

GRMZM2G157156b

PDZ/DHR/GLGF. Serine signalling proteases with PDZ domains

78,171,783

GRMZM2G350684b, GRMZM2G018048b

SANT_DNA-bd. Novel transcriptional regulatory proteins that were identified based on homology to the DNA binding domain of c-myb.

 

GRMZM2G018142b

HAS protein. Found in helicases and associated with SANT domains

10

140,987,405

GRMZM2G109753b

Scramblase protein, responsible for the translocation of phospholipids between the two monolayers of a lipid bilayer of a cell membrane

  1. aPosition in bp according to B73Ref_V2
  2. bThese genes have known involvement as metabolic or signaling genes in the disease resistance