Trait a | QTL | SNP markerb | Bin | Pos. | BA09A | BA09B | Kenya09 | BA10 | BA11 | Celaya12 | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P d | R2,e | P d | R2,e | P d | R2,e | P d | R2,e | P d | R2,e | P d | R2,e | |||||
FDR | rp1.1 | PZE-101149049 | 1.06 | 192,154,274 | n.s. | – | n.s. | – | n.s. | – | 1.62 × 10 − 05 | 7.6 | 3.46 × 10− 02 | 2.3 | n.s. | – |
 | PZE-101149055 | 1.06 | 192,158,701 | n.s. | – | n.s. | – | n.s. | – | 2.44 × 10 − 05 | 7.4 | 3.28 × 10− 02 | 2.4 | n.s. | – | |
 | PZE-101149110 | 1.06 | 192,280,029 | n.s. | – | n.s. | – | n.s. | – | 1.64 × 10 − 05 | 7.6 | 3.58 × 10− 02 | 2.3 | n.s. | – | |
rp3.1 | PZE-103064079 | 3.04 | 97,422,248 | 2.04 × 10− 04 | 4.72 | 5.13 × 10− 03 | 2.8 | 6.66 × 10− 03 | 2.5 | 3.11 × 10–03 | 3 | 2.94 × 10 − 05 | 6.4 | 8.81x 10-03 | 2.34 | |
rp3.2 | PZE-103072633 | 3.04 | 115,864,889 | n.s. | – | n.s. | – | n.s. | – | n.s. | – | 9.10 × 10 − 06 | 8.2 | 1.86x 10-02 | 1.85 | |
rp6.1 | PZE-106060721 | 6.04 | 111,526,964 | n.s. | – | n.s. | – | 2.54 × 10 −05 | 7 | n.s. | – | n.s. | – | n.s. | – | |
rp8.2 | PZE-108085787 | 8.05 | 141,439,732 | n.s. | – | n.s. | – | n.s. | – | n.s. | – | 1.49 × 10 − 05 | 6.7 | n.s. | – | |
MDR | rp1.1 | PZE-101149049 | 1.06 | 192,154,274 | n.s. | – | n.s. | – | ∕ | ∕ | 1.92 × 10 −05 | 7.7 | n.s. | – | n.s. | – |
 | PZE-101149110 | 1.06 | 192,280,029 | n.s. | – | n.s. | – | ∕ | ∕ | 1.89 × 10 −05 | 7.7 | n.s. | – | n.s. | – | |
rp3.1 | PZE-103063977 | 3.04 | 97,261,544 | 2.19 × 10−04 | 4.83 | 9.30 × 10−03 | 2.51 | ∕ | ∕ | 2.97 × 10−03 | 3.1 | 6.77 × 10 −06 | 7.4 | 1.75 x 10-02 | 1.98 | |
 | PZE-103063980 | 3.04 | 97,261,646 | 2.19 × 10− 04 | 4.83 | 9.30 × 10− 03 | 2.51 | ∕ | ∕ | 2.80 × 10−03 | 3.1 | 8.34 × 10 − 06 | 7.3 | 1.75 x 10-02 | 1.98 | |
 | PZE-103064079 | 3.04 | 97,422,248 | 1.89 × 10−04 | 4.99 | 4.92 × 10− 03 | 3 | ∕ | ∕ | 2.31 × 10−03 | 3.3 | 5.65 × 10 −06 | 7.7 | 8.70-03 | 2.46 | |
 | PZA-002742001 | 3.04 | 97,441,784 | 1.26 × 10−03 | 3.74 | n.s. | – | ∕ | ∕ | 1.90 × 10−02 | 1.9 | 1.61 × 10 −05 | 6.8 | 4.09 x 10-02 | 1.50 | |
rp8.2 | PZE-108085787 | 8.05 | 141,439,732 | 2.30 × 10− 02 | 1.78 | n.s. | – | ∕ | ∕ | n.s. | – | 9.03 × 10 −06 | 7.1 | n.s. | – | |
AUDPC | rp1.1 | PZE-101149049 | 1.06 | 192,154,274 | n.s. | – | n.s. | – | ∕ | ∕ | 1.07 × 10 −05 | 8.2 | 4.05 × 10− 02 | 2.3 | n.s. | – |
 | PZE-101149055 | 1.06 | 192,158,701 | n.s. | – | n.s. | – | ∕ | ∕ | 2.19 × 10 −05 | 7.7 | 3.03 × 10− 02 | 2.5 | n.s. | – | |
 | PZE-101149110 | 1.06 | 192,280,029 | n.s. | – | n.s. | – | ∕ | ∕ | 1.06 × 10 −05 | 8.2 | 4.17 × 10− 02 | 2.2 | n.s. | – | |
rp3.1 | PZE-103063942 | 3.04 | 97,157,105 | 2.71 × 10−04 | 5.79 | n.s. | – | ∕ | ∕ | 1.40 × 10−02 | 3 | 3.18 × 10 −05 | 7.6 | 5.19 x 10-03 | 2.59 | |
 | PZE-103063977 | 3.04 | 97,261,544 | 1.33 × 10−04 | 5.15 | 2.09 × 10− 02 | 1.85 | ∕ | ∕ | 6.84 × 10−03 | 2.6 | 8.42 × 10 −06 | 7.2 | 1.33 x 10-02 | 2.02 | |
 | PZE-103063980 | 3.04 | 97,261,646 | 1.33 × 10−04 | 5.15 | 2.09 × 10− 02 | 1.85 | ∕ | ∕ | 6.63 × 10−03 | 2.6 | 1.03 × 10 −05 | 7.1 | 1.33 x 10-02 | 2.02 | |
 | PZE-103064079 | 3.04 | 97,422,248 | 1.59 × 10−04 | 5.11 | 1.27 × 10− 02 | 2.19 | ∕ | ∕ | 5.70 × 10−03 | 2.7 | 8.08 × 10 −06 | 7.4 | 8.91 x 10-03 | 2.29 | |
 | PZA-002742001 | 3.04 | 97,441,784 | 4.94 × 10−04 | 4.38 | n.s. | – | ∕ | ∕ | 3.24 × 10−02 | 1.6 | 1.53 × 10 −05 | 6.9 | 4.38 x 10-02 | 1.37 | |
rp5.1 | PZB00182.1 | 5.02 | 10,055,423 | 2.66 × 10 −05 | 7.38 | n.s. | – | ∕ | ∕ | n.s. | – | 1.22 × 10−02 | 3.1 | n.s. | – | |
rp8.1 | SYN30855 | 8.03 | 72,047,084 | 2.33 × 10 −08 | 12.7 | 2.42 × 10−02 | – | ∕ | ∕ | n.s. | – | n.s. | – | n.s. | – | |
 | PZE-108044485 | 8.03 | 72,168,101 | 1.77 × 10 −05 | 7.93 | n.s. | – | ∕ | ∕ | n.s. | – | n.s. | – | n.s. | – | |
 | PZE-108044552 | 8.03 | 72,223,299 | 1.69 × 10 −05 | 7.72 | n.s. | – | ∕ | ∕ | n.s. | – | 6.70 × 10−03 | 3.5 | n.s. | – | |
 | PZE-108044562 | 8.03 | 72,238,277 | 2.16 × 10 −08 | 12.7 | 2.13 × 10−02 | 2.6 | ∕ | ∕ | n.s. | – | 6.24 × 10−04 | 5.2 | n.s. | – | |
 | PZE-108045789 | 8.03 | 74,430,017 | 1.98 × 10 −08 | 13 | 2.49 × 10− 02 | 2.55 | ∕ | ∕ | n.s. |  | 2.12 × 10−04 | 6.1 | n.s. | – | |
 | PZE-108045901 | 8.03 | 74,476,703 | 2.22 × 10 −08 | 12.7 | 2.25 × 10−02 | 2.56 | ∕ | ∕ | n.s. | – | 2.10 × 10− 02 | 2.7 | n.s. | – | |
 | PZE-108047302 | 8.03 | 78,171,783 | 1.80 × 10 −05 | 7.7 | n.s. | – | ∕ | ∕ | n.s. | – | n.s. | – | n.s. | – | |
 | PZE-108047365 | 8.03 | 78,293,010 | 1.47 × 10 −05 | 7.82 | n.s. | – | ∕ | ∕ | n.s. | – | 5.32 × 10−03 | 3.7 | n.s. | – | |
 | PZE-108047455 | 8.03 | 78,555,578 | 1.57 × 10 −05 | 7.79 | n.s. | – | ∕ | ∕ | n.s. | – | 6.78 × 10−03 | 3.6 | n.s. | – | |
 | PZE-108047486 | 8.03 | 78,677,089 | 1.63 × 10 −05 | 7.99 | n.s. | – | ∕ | ∕ | n.s. | – | 6.46 × 10−03 | 3.6 | n.s. | – | |
 | PZE-108047488 | 8.03 | 78,684,842 | 1.74 × 10 −05 | 7.71 | n.s. | – | ∕ | ∕ | n.s. | – | 5.53 × 10−03 | 3.7 | n.s. | – | |
 | PZE-108047536 | 8.03 | 78,758,640 | 1.46 × 10 −05 | 7.83 | n.s. | – | ∕ | ∕ | n.s. | – | 5.29 × 10−03 | 3.7 | n.s. | – | |
rp8.2 | PZE-108085787 | 8.05 | 141,439,732 | 1.95 × 10−02 | 1.86 | 6.30 × 10−02 | 1.16 | ∕ | ∕ | n.s. | – | 1.52 × 10 −05 | 6.7 | n.s. | – | |
rp10.1 | PZE-110093359 | 10.1 | 140,987,405 | 1.89 × 10 −05 | 8.78 | 2.57 × 10−02 | 2.73 | ∕ | ∕ | n.s. | – | n.s. | – | n.s. | – |