Table 3 Effect of low Pi on transcriptional level of the iron absorption related genes detected via illumina expression profile sequencing
From: Iron and callose homeostatic regulation in rice roots under low phosphorus
Ensemble_id | Description | TJ981 | ZH6 | ZD99 | |||
|---|---|---|---|---|---|---|---|
Log2FC | P-Value | Log2FC | P-Value | Log2FC | P-Value | ||
OS03G0667300 | Fe2+ transport protein 2 (IRT) | −2.683 | 5.00E-05 | −3.766 | 5.00E-05 | − 2.082 | 0.0003 |
OS03G0307200 | Nicotianamine synthase 2 (NA2) | −2.731 | 5.00E-05 | −5.639 | 5.00E-05 | −2.353 | 5.00E-05 |
OS03G0307300 | Nicotianamine synthase 1 (NA1) | −2.722 | 5.00E-05 | −5.612 | 5.00E-05 | −2.433 | 5.00E-05 |
OS02G0306401 | Nicotianamine aminotransferase (NAAT) | −2.817 | 5.00E-05 | −5.166 | 5.00E-05 | −2.813 | 5.00E-05 |
OS02G0650300 | Iron-phytosiderophore transporter (YSL15) | −2.474 | 5.00E-05 | −4.732 | 5.00E-05 | −2.695 | 5.00E-05 |
OS02G0649900 | Metal-nicotianamine transporter (YSL2) | −4.446 | 5.00E-05 | −4.201 | 5.00E-05 | −2.774 | 5.00E-05 |
OS04G0542200 | Probable metal-nicotianamine transporter (YSL9) | −1.485 | 5.00E-05 | −1.419 | 5.00E-05 | −0.694 | – |
OS07G0258400 | Metal transporter Nramp1 (OsNRAMP1) | −2.134 | 5.00E-05 | −3.658 | 5.00E-05 | −2.479 | 5.00E-05 |
OS05G0472400 | Zinc/iron permease family protein (ZIP) | −2.158 | 5.00E-05 | −2.688 | 5.00E-05 | −2.677 | 5.00E-05 |
OS03G0811900 | ADP-ribosylation factor 1-like (ARF1) | −0.200 | – | −1.043 | 5.00E-04 | −0.706 | – |
OS01G0265100 | ADP-ribosylation factor 2-like (ARF2) | −0.313 | – | − 1.036 | 5.00E-04 | −0.636 | – |
OS01G0667600 | Ras-related protein RABA1f (RabGTPase) | −2.127 | 5.00E-05 | −1.421 | 5.00E-04 | −0.173 | – |
OS08G0525000 | Ras-related protein RABA5c (RabGTPase) | −0.951 | – | − 1.030 | 5.00E-05 | −0.294. | – |
OS03G0843100 | ras-related protein RABA2a (RabGTPase) | −1.122 | 5.00E-05 | −1.490 | 5.00E-05 | −1.134 | 5.00E-05 |
OS09G0500900 | Ferric reductase transmembrane domain containing protein (FR) | 0.695 | – | 1.032 | 0.021 | 0.968 | – |
OS04G0538400 | Vacuolar iron transporter2 (VIT2) | 3.313 | 5.00E-05 | 1.504 | 5.00E-05 | 5.142 | 5.00E-05 |
OS09G0396900 | Vacuolar iron transporter 1.2 (VIT1.2) | 3.857 | 5.00E-05 | 2.403 | 5.00E-05 | 1.357 | 5.00E-05 |