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Table 2 List of up-regulated contigs in Creso and Svevo wheat roots with high sequence similarity to transcription factors

From: Activation of a gene network in durum wheat roots exposed to cadmium

Contig ID Creso roots FC Svevo roots FC TAIR AGI CODE TAIR Annotation
CTRL +Cd CTRL +Cd
contig33526 1.7 2.8 1.7 2.8 5.7 2.0 AT1G27730 salt tolerance zinc finger (ZAT10)
contig41708 5.7 13.5 2.3 8.3 19.9 2.4 AT1G27730
contig57171 4.1 9.1 2.2 7.1 20.2 2.8 AT1G27730
contig72518 0.9 2.0 2.3 1.5 6.8 4.4 AT1G27730
contig12928 16.3 40.6 2.5 13.1 41.1 3.1 AT2G28160 basic helix-loop-helix (bHLH) DNA-binding (bHLH29/FIT)
contig50497 9.1 15.6 1.7 6.9 21.3 3.1 AT2G28160
contig69766 6.1 12.6 2.1 5.6 15.6 2.8 AT2G28160
contig33459 6.3 15.3 2.4 8.1 25.1 3.1 AT2G38470 WRKY DNA-binding protein 33 (WRKY33)
contig42013 6.7 16.9 2.5 10.2 30.0 2.9 AT2G38470
contig50500 4.6 10.2 2.2 5.9 13.4 2.3 AT2G38470
contig54713 1.4 1.7 1.3 1.4 16.5 11.5 AT2G38470
contig64297 3.2 9.3 2.9 6.1 13.1 2.1 AT3G20310 ethylene response factor 7 (ERF7)
contig81176 1.1 3.5 3.3 2.2 10.0 4.5 AT3G20310
contig25001 4.6 16.3 3.5 5.5 11.1 2.0 AT3G47640 basic helix-loop-helix (bHLH) DNA-binding (bHLH47/PYE)
contig49051 0.7 1.4 2.1 1.6 7.0 4.4 AT3G47640
contig119028 0.9 7.8 8.9 0.7 4.7 6.6 AT3G56970 basic helix-loop-helix (bHLH) DNA-binding (bHLH38/ORG2)
contig59732 4.7 16.0 3.4 4.6 15.5 3.4 AT3G56970
contig45646 3.6 8.1 2.2 5.3 12.0 2.3 AT4G23810 WRKY DNA-binding protein 53 (WRKY53)
contig25913 4.8 11.9 2.5 7.6 17.4 2.3 AT5G24110 WRKY DNA-binding protein 30 (WRKY30)
contig64256 3.5 8.9 2.5 5.2 11.2 2.2 AT5G24110
contig67994 2.0 6.8 3.4 5.0 10.8 2.2 AT5G24110
contig74889 1.7 3.6 2.1 2.7 5.1 1.9 AT5G24110