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Table 1 Aggregate information on the genomic profile of Xanthomonas oryzae pv. oryzae sRNAs

From: Two virulent sRNAs identified by genomic sequencing target the type III secretion system in rice bacterial blight pathogen

  Bacterial cultures froma
PSA XOM2
Total number of reads
 Abundant 14,287,830 12,748,596
 Unique 7,143,915 6,374,298
Mapped to Xoo PXO99A genome
 Total 12,415,866 (86.90%) 12,215,742 (95.82%)
 Multiple mapped 943,376 (6.60%) 1,340,672 (10.52%)
 Uniquely mapped 11,472,490 (80.30%) 10,875,070 (85.30%)
Number of candidate sRNA 601
 Total 482 459
 Trans- 256 260
 Cis- 226 199
  1. aPSA a medium used for Xoo regular growth, XOM2 a medium used to induce expression of Xoo genes associated with virulence
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BMC Plant Biology

ISSN: 1471-2229

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