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Table 1 Aggregate information on the genomic profile of Xanthomonas oryzae pv. oryzae sRNAs

From: Two virulent sRNAs identified by genomic sequencing target the type III secretion system in rice bacterial blight pathogen

 

Bacterial cultures froma

PSA

XOM2

Total number of reads

 Abundant

14,287,830

12,748,596

 Unique

7,143,915

6,374,298

Mapped to Xoo PXO99A genome

 Total

12,415,866 (86.90%)

12,215,742 (95.82%)

 Multiple mapped

943,376 (6.60%)

1,340,672 (10.52%)

 Uniquely mapped

11,472,490 (80.30%)

10,875,070 (85.30%)

Number of candidate sRNA

601

 Total

482

459

 Trans-

256

260

 Cis-

226

199

  1. aPSA a medium used for Xoo regular growth, XOM2 a medium used to induce expression of Xoo genes associated with virulence
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BMC Plant Biology

ISSN: 1471-2229

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