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Table 4 The correlation between evolutionary rate, gene feature, and gene expression in Glycine max duplicates

From: WRKY transcription factors in legumes

 

Young leaf

Flower

One cm pod

Pod shell 10DAF

Pod shell 14DAF

Seed 10DAF

Seed 14DAF

Seed 21DAF

Seed 25DAF

Seed 28DAF

Seed 35DAF

Seed 42DAF

Root

Nodule

K s

0.16331

0.0698

−0.0229

0.10568

0.10625

−0.06594

0.1175

0.19648

0.18418

0.15055

0.21299

0.2218

−0.07009

0.03759

K a

−0.06796

−0.1692

− 0.29357

−0.14733

− 0.08252

−0.3319*

− 0.23597

−0.11462

− 0.21668

−0.20247

− 0.09324

−0.1118

− 0.4617**

−0.1818

K a /K s

−0.20271

−0.2411

− 0.31353*

−0.27015

− 0.12681

−0.36376*

− 0.42364**

−0.32785*

− 0.46039**

−0.42072**

− 0.36024*

−0.4012**

− 0.52122**

−0.23178

Fop

0.29568

0.30819*

0.34913*

0.35181*

0.26262

0.38268*

0.39778*

0.3624*

0.49315**

0.53284**

0.44177**

0.50804**

0.36783*

0.43526**

Polypeptide length

0.06744

0.04395

0.08372

−0.00281

−0.07692

0.16338

0.12091

0.1345

0.18838

0.20758

0.22477

0.19481

0.09388

0.20409

GC1

0.01633

0.05774

0.3434*

0.00975

−0.14317

0.38559*

0.32063*

0.32252*

0.23863

0.2538

0.21561

0.22572

0.40488**

0.22962

GC2

0.32679*

0.32974*

0.42521**

0.29401

0.21021

0.50622**

0.52072**

0.46359**

0.57195**

0.57169**

0.48728**

0.47168**

0.65552**

0.46916**

GC3

0.16546

0.20181

0.28002

0.16329

0.17571

0.25886

0.31821*

0.30376

0.28938

0.28818

0.19329

0.21183

0.45942**

0.31169*

  1. DAF day after flowering, Fop frequency of optimal codons, GC1 GC content at first codon positions, GC2 GC content at second codon positions, GC3 GC content at third codon positions, Ks synonymous substitution ratio, Ka nonsynonymous substitution ratio, Ka/Ks nonsynonymous to synonymous substitution ratio
  2. *indicates significance at P < 0.05; **indicates significance at P < 0.01