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Table 1 KEGG pathway enrichment of differentially expressed genes (DEGs) in multiple comparisons

From: Molecular mechanism of the extended oil accumulation phase contributing to the high seed oil content for the genotype of tung tree (Vernicia fordii)

 

#Pathway

KO

Enrichment Factor

Q-value

GeneNumber

L7 vs. H7

\

    

L14 VS. H14

Photosynthesis - antenna proteins

ko00196

12.23

1.E-06

9

L21 VS. H21

\

    

L35 VS. H35

\

    

 L49 VS. H49

Fatty acid degradation

ko00071

3.4

2.E-04

18

Glycolysis / Gluconeogenesis

ko00010

2.2

3.E-04

37

Tyrosine metabolism

ko00350

3.01

1.E-03

18

H35 VS. H49

\

    

 L35 VS. L49

Glycolysis / Gluconeogenesis

ko00010

2.88

4.E-03

18

  1. L, seed from Tree L with low final oil seed content;
  2. H, seed from tree H with high final oil content;
  3. Arabia number following H or L indicated days after start point of oil accumulation;
  4. Pathway, Name for KEGG pathway;
  5. KO, KEGG Orthology;
  6. Enrichment Factor, the ratio value of DEGs and all genes devoted in certain pathways;
  7. Q-value, the corrected P value in multiple hypothesis testing;
  8. Gene Number, DEGs number that enriched in certain pathway;
  9. \”, no pathways that enriched in the pathway