Skip to main content

Table 1 List of primer sequences used for RT-qPCR analyses

From: Autophagy counteracts instantaneous cell death during seasonal senescence of the fine roots and leaves in Populus trichocarpa

Gene

Primer Sequences

ATG7

F - 5’-GGAATCGAATTCCTGCTTCA-3’

R - 5’-TGTCTCATCATCCCAGTCCA-3’

ATG8c

F - 5’-TGCCTGTGTTACGGATCTTG-3’

R - 5’-ACCCCAAATGTGTTCTCACC-3’

ATG8d

F – 5’-GCCAACAGTGAGATCAGCAG-3’

R – 5’-GGGACTTTGTGAGGTGTGCT-3’

ATG8g

F - 5’-CGTTGCCTCAAACAGCAAGT -3’

R – 5’-AGAAAGGATGATACAGCTTAGCCA-3’

ATG8h

F - 5’-TAGAGAGGTGGTTGGGTGCT-3’

R – 5’-CCTGCTTCTGACCCTTCTTG-3’

ATG11

F- 5’- AGAGCTGCTTGACAAGTACCCA-3’

R- 5’-CTTTCCTTGTTTGCCTGCTTCT-3’

ATG18

F - 5’-GACAATGACGAGCCAGGATT-3’

R – 5’- AGAGTTCGAGTGGCTGGAGA-3’

ß-TUBULIN

F – 5’-TTCTCCTGAACATGGCAGTG-3’

R - 5’-CCACACAACGTGAAATCCAG-3’

GAPDH

F - 5’-CAATGAATGGGGCTACAGGT-3’

R – 5’-CATGAATCAGCTGCACATCC-3’

UBIQUITIN

F - 5’-AGGAACGCGTTGAGGAGAAG -3’

R – 5’-TATAABCAAAAACCGCCCCTG -3’

  1. F forward primer, R reverse primer