Table 4 miRNA regulation of DEGs in DTS and CK samples

miR164a

TGGAGAAGCAGGGCACGTGCA

TRINITY_DN23818_c1_g2

up

NAC22_ARATH

NAC domain-containing protein 21/22

miR172e-3p

GAATCTTTAGACGCATGCAT

TRINITY_DN25766_c0_g2

up

miR6225-5p

TAACTAGGCTCAAAAGATTCGTCT

TRINITY_DN23398_c1_g2

up

NC100_ARATH

NAC domain-containing protein 100

miR6284

TTTGGACGCATGCATGGAGCATT

TRINITY_DN25766_c0_g2

up

NAC22_ARATH

NAC domain-containing protein 21/22

miR854a

GAGGAGGAAGAGGAGGAGGAG

TRINITY_DN23794_c0_g2

up

NIP21_MAIZE

Aquaporin NIP2–1

miR6220-5p

CTCCATCCCAAATTATAAGACGTT

TRINITY_DN26349_c2_g1

down

TIP42_MAIZE

Aquaporin TIP4–2

miR6248

TAATTTGGAATGGAGGGAGTA

miR2671j

TTAAAAGATTCGTCTCGTCCA

TRINITY_DN28159_c3_g1

down

GRF5_ORYSJ

Growth-regulating factor 5

miR396e-5p

TCCACAGGCTTTCTTGAACTG

miR4993

AGCAGCGGCGGTGGCGGATGC

TRINITY_DN22667_c2_g2

up

LEA14_GOSHI

Late embryogenesis abundant protein Lea14-A

miR5175a

TTAGAATTTGGAAAGGAGGGA

TRINITY_DN26424_c6_g1

up

LEA5_CITSI

Late embryogenesis abundant protein Lea5

miR5205b

CTTATAATTTGGGATGGAGGGAGT

miR5568f-3p

TCTTATAATTTGGAATGGAGG

miR6220-3p

AATGACTTATAATTTGGGATGGAG

miR6248

TAATTTGGAATGGAGGGAGTA

miR5568f-3p

TCTTATAATTTGGAATGGAGG

TRINITY_DN16664_c1_g1

up

LEA5D_GOSHI

Late embryogenesis abundant protein Lea5-D

miR6248

TAATTTGGAATGGAGGGAGTA

TRINITY_DN17990_c0_g1

up

EF114_ARATH

Ethylene-responsive transcription factor ERF114

miR854a

GAGGAGGAAGAGGAGGAGGAG

TRINITY_DN20050_c2_g1

up

TRINITY_DN24075_c2_g3

up

ERF53_ARATH

Ethylene-responsive transcription factor ERF053

miR4993

AGCAGCGGCGGTGGCGGATGC

TRINITY_DN22160_c1_g2

up

ERF60_ARATH

Ethylene-responsive transcription factor ERF060

miR1023a-3p

CAAGAATTGGATGAAGTGCAT

TRINITY_DN22589_c0_g1

down

R13L3_ARATH

Putative disease resistance RPP13-like protein 3

miR3522

AGCCCAAGTCGAGACAGCTGA

TRINITY_DN20821_c1_g2

down

miR6220-5p

CTCCATCCCAAATTATAAGACGTT

TRINITY_DN17917_c0_g2

down

RGA1_SOLBU

Putative disease resistance protein RGA1

miR8014-3p

ATTAATCAATGTTTGGACAATT

TRINITY_DN20066_c3_g1

down

RGA3_SOLBU

Putative disease resistance protein RGA3

miR854a

GAGGAGGAAGAGGAGGAGGAG

TRINITY_DN22688_c0_g1

down

TRINITY_DN25829_c1_g3

up

miR6220-5p

CTCCATCCCAAATTATAAGACGTT

TRINITY_DN25593_c2_g1

up

RGA4_SOLBU

Putative disease resistance protein RGA4

miR5205b

CTTATAATTTGGGATGGAGGGAGT

TRINITY_DN24732_c1_g1

down

RK12_ORYSJ

50S ribosomal protein L12, chloroplastic

miR5568f-3p

TCTTATAATTTGGAATGGAGG

miR6248

TAATTTGGAATGGAGGGAGTA

miR854a

GAGGAGGAAGAGGAGGAGGAG

TRINITY_DN18780_c1_g2

down

RK28_ARATH

50S ribosomal protein L28, chloroplastic

TRINITY_DN25639_c1_g1

down

WRK19_ARATH

Probable WRKY transcription factor 19

TRINITY_DN23859_c0_g1

up

WRK40_ARATH

Probable WRKY transcription factor 40

miR172e-3p

GAATCTTTAGACGCATGCAT

TRINITY_DN19490_c0_g1

up

WRK54_ARATH

Probable WRKY transcription factor 54

miR6284

TTTGGACGCATGCATGGAGCATT

miR1436

ACTTTCAATGGGACGGAGGGAGT

TRINITY_DN22501_c1_g1

up

WRK57_ARATH

Probable WRKY transcription factor 57

miR4993

AGCAGCGGCGGTGGCGGATGC

miR5205b

CTTATAATTTGGGATGGAGGGAGT

miR6220-3p

AATGACTTATAATTTGGGATGGAG

miR5139

AACCTGGCTCCGATACCA

TRINITY_DN18434_c1_g4

up

5NG4_PINTA

Auxin-induced protein 5NG4