Table 3 Important gene families in response to water deficit in sugarcane leaves
Family | annotated | identified (>  5 TPM) | up-regulated | down-regulated |
|---|---|---|---|---|
Aquaporin | 60 | 22 | 8 | 3 |
LEA | 13 | 6 | 6 | 0 |
auxin-related | 175 | 72 | 7 | 7 |
heat shock protein | 68 | 33 | 5 | 1 |
transcription factor | 882 | 425 | 70 | 36 |
chlorophyll a-b binding protein | 59 | 27 | 0 | 22 |
light-regulated proteins | 1 | 1 | 0 | 1 |
non-specific lipid-transfer protein | 40 | 11 | 5 | 2 |
disease resistance protein | 1458 | 456 | 14 | 45 |
ribosomal protein | 809 | 333 | 2 | 18 |
dehyrin | 5 | 4 | 4 | 0 |