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Table 3 Summary of expression pattern of transcripts differentially expressed in lop138, putatively encoding for proteins involved in reproduction

From: Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

GO term

Proteins

Transcript ID

Stage showing high expression in R35

Stage showing high expression in lop138

Megasporogenesis

SAP

Comp81836_c0_seq1

Pre-embryo (stage 5) and post-embryo (stages 7 and 10)

Post-pollination

SAP

Comp49985_c0_seq1

Post-embryo (stages 7 and 10)

Post-pollination

SAP

Comp62432_c0_seq1

Pre-embryo (stage 5) and post-embryo (stages 7, 8 and 10)

Post-pollination

SPL8

Comp6730_c0_seq1

Pre-embryo (stages 3–6)

Pre-pollination

TRN2

Comp21891_c0_seq1

Pre-embryo (stages 3–6)

Pre-pollination

Pre-meiotic DNA replication

MCM2

Comp5410_c0_seq7

Pre-embryo (stages 3 and 4)

Post-pollination

MCM2

Comp5410_c0_seq3

Pre-embryo (stages 3 and 4)

Post-pollination

MCM6

Comp4705_c0_seq1

Pre-embryo (stages 3 and 4)

Post-pollination

RAF1

Comp49064_c0_seq1

Pre-embryo and post-embryo (stages 3–7)

Unchanged

Regulation of induction of conjugation upon nitrogen starvation

RCD1

Comp13829_c0_seq3

Post-embryo (stages 7–10) (three sequences)

Post-pollination (four sequences)

RCD1

Comp13829_c0_seq5

Post-embryo (stages 7–10)

Post-pollination

RCD1

Comp13829_c0_seq7

Post-embryo (stages 7–10)

Post-pollination

RCD1

Comp13829_c0_seq8

unchanged

Post-pollination

Regulation of double fertilization forming a zygote and endosperm

EC1.4

Comp22473_c0_seq1

Pre-embryo (stage 5) and Post-embryo (stage 7)

Pre-pollination

EC1.3

Comp5485_c0_seq1

Pre-embryo (stage 5) and Post-embryo (stage 7)

Pre-pollination

EC1.1

Comp12842_c0_seq3

Pre-embryo (stage 5) and Post-embryo (stage 7)

Pre-pollination

EC1.2

Comp14346_c0_seq1

Pre-embryo (stage 5)

Pre-pollination

EC1.3

Comp12842_c0_seq1

Pre-embryo (stage 5) and Post-embryo (stage 7)

Pre-pollination

EC1.3

Comp60_c0_seq2

Post-embryo (stages 8–10)

Post-pollination