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Table 2 Annotations of energy metabolism-related DEGs

From: Comparative transcriptome analysis reveals that tricarboxylic acid cycle-related genes are associated with maize CMS-C fertility restoration

Gene ID Log2 Fold Change Directiona Metabolism Process Description
GRMZM2G345493 −11.00 down Glycolysis/Pentose phosphate pathway Fructose-bisphosphate aldolase 7 cytosolic
GRMZM5G836250 −9.81 down Glycolysis/Pentose phosphate pathway Fructose-1,6-bisphosphatase cytosolic
GRMZM2G134256 −7.14 down Pentose phosphate pathway Transaldolase 2
GRMZM2G046284 −6.94 down Glycolysis/Pentose phosphate pathway Fructose-bisphosphate aldolase
GRMZM2G046804 −6.85 down Glycolysis Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1
GRMZM2G001696 −6.84 down Glycolysis/Pyruvate metabolism Phosphoenolpyruvate carboxykinase1
GRMZM2G038791 −6.07 down Pentose phosphate pathway Ribose-phosphate pyrophosphokinase
GRMZM2G047592 −5.29 down Glycolysis Galactose mutarotase-like superfamily protein
GRMZM2G080375 −4.97 down Glycolysis/Pentose phosphate pathway ATP-dependent 6-phosphofructokinase 4 chloroplastic
GRMZM2G442658 −4.02 down Glycolysis Alcohol dehydrogenase 1
GRMZM2G155253 −3.39 down Glycolysis/Pyruvate metabolism Fructose-bisphosphate aldolase
GRMZM2G031107 −3.23 down Pentose phosphate pathway Glucose-6-phosphate 1-dehydrogenase
GRMZM2G083841 −3.18 down Pyruvate metabolism Phosphoenolpyruvate carboxylase 1
GRMZM5G852968 −2.91 down Glycolysis Triosephosphate isomerase
GRMZM2G306732 −2.78 down Glycolysis/Pentose phosphate pathway Fructose-1,6-bisphosphatase
GRMZM2G129513 −2.69 down Pyruvate metabolism Malate dehydrogenase 6
GRMZM2G026807 −2.39 down Pentose phosphate pathway Ribulose-phosphate 3-epimerase
GRMZM2G144730 −2.28 down Glycolysis/Pyruvate metabolism Pyruvate kinase
GRMZM2G127546 −2.09 down Glycolysis/Pyruvate metabolism Pyruvate dehydrogenase E1 component subunit beta-3 chloroplastic
GRMZM5G870932 −2.01 down Glycolysis/Pyruvate metabolism Phosphoenolpyruvate carboxykinase homologue 2
GRMZM2G415359 −1.96 down Pyruvate metabolism Malate dehydrogenase 5
GRMZM2G179521 −1.94 down Pentose phosphate pathway Glucose-6-phosphate 1-dehydrogenase
GRMZM5G879882 −1.92 down Glycolysis/Pentose phosphate pathway 6-phosphofructokinase
GRMZM2G041356 −1.80 down Glycolysis Aldose 1-epimerase
GRMZM2G152975 −1.75 down Glycolysis Putative alcohol dehydrogenase superfamily protein
GRMZM2G033208 −1.55 down Pentose phosphate pathway Transketolase 1
GRMZM5G824600 No expression in NIL_Rf4 down Glycolysis Formaldehyde dehydrogenase homologue 1
GRMZM2G152981 0.40 up Glycolysis Putative alcohol dehydrogenase superfamily protein
GRMZM2G104632 1.50 up Glycolysis Glyceraldehyde-3-phosphate dehydrogenase, cytosolic
GRMZM2G057823 1.53 up Glycolysis/Pentose phosphate pathway Aldolase 1
GRMZM2G335657 1.56 up Glycolysis/Pyruvate metabolism Dihydrolipoyl dehydrogenase
GRMZM2G104081 1.64 up Glycolysis Hexokinase 1
GRMZM2G069542 1.85 up Pyruvate metabolism Phosphoenolpyruvate carboxylase 7
GRMZM2G466833 1.92 up Pyruvate metabolism Malate dehydrogenase3
GRMZM2G180625 1.93 up Glycolysis Cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC2
GRMZM2G023289 2.02 up Glycolysis/Pentose phosphate pathway Phosphoglucomutase 2
GRMZM2G043198 2.07 up Glycolysis/Pentose phosphate pathway Pyruvate dehydrogenase 2
GRMZM2G097226 2.15 up Glycolysis/Pyruvate metabolism Pyruvate dehydrogenase E1 beta subunit
GRMZM2G125233 2.28 up Glycolysis Galactose mutarotase-like superfamily protein
GRMZM2G440208 2.43 up Pentose phosphate pathway 6-phosphogluconate dehydrogenase, decarboxylating
GRMZM2G098346 2.50 up Glycolysis Alcohol dehydrogenase 2
GRMZM2G066024 2.52 up Glycolysis/Pentose phosphate pathway Fructose-bisphosphate aldolase cytoplasmic isozyme
GRMZM2G139360 2.54 up Glycolysis/Pentose phosphate pathway ATP-dependent 6-phosphofructokinase 5 chloroplastic
GRMZM2G136918 2.73 up Pentose phosphate pathway Putative 6-phosphogluconolactonase 1
GRMZM2G058702 2.74 up Glycolysis/Pyruvate metabolism Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex chloroplastic
GRMZM2G162663 2.84 up Glycolysis/Pyruvate metabolism Acetyl-coenzyme A synthetase chloroplastic/glyoxysomal
GRMZM2G161245 2.96 up Pyruvate metabolism Malate dehydrogenase
GRMZM5G860137 3.01 up Pyruvate metabolism Acetyl-CoA acetyltransferase, cytosolic 2
GRMZM2G177947 3.12 up Glycolysis/Pyruvate metabolism Pyruvate kinase
GRMZM2G110714 3.18 up Pyruvate metabolism Phosphoenolpyruvate carboxylase 3
GRMZM2G074122 3.25 up Pyruvate metabolism Phosphoenolpyruvate carboxylase isoform 1
GRMZM2G322953 3.42 up Glycolysis Fructose-1,6-bisphosphatase, cytosolic
GRMZM2G003385 3.53 up Glycolysis/Pentose phosphate pathway 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1
GRMZM5G886257 4.17 up Pyruvate metabolism NADP-dependent malic enzyme
GRMZM2G146206 4.19 up Glycolysis Triosephosphate isomerase, cytosolic
GRMZM2G003354 4.62 up Glycolysis Apospory-associated protein C
GRMZM2G154007 12.00 up Glycolysis Alcohol dehydrogenase-like 2
GRMZM2G071630 No expression in NIL_rf4 up Glycolysis Cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3
  1. aDirection means relative to the expression level in NIL_Rf4