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Fig. 3 | BMC Plant Biology

Fig. 3

From: AgriSeqDB: an online RNA-Seq database for functional studies of agriculturally relevant plant species

Fig. 3

The full screenshot showing AT2G40170 gene expression in GeneView (eFP) browser. The user uses the search form at the top to select the gene of interest and select the mode of operation including: (1) absolute, shows the counts as stored in the database for the primary gene, (2) relative, shows the counts relative to the control for primary gene, and (3) compare, counts as a ratio between the primary and secondary genes. Clicking the view button updates the figure below to show the expression levels of each sample by colour coding the fill area with a scale red-yellow (for absolute) and red-grey-blue (for relative and compare). Alternatively, the user can click the download button (indicated by a green arrowhead) to download the expression image at twice the resolution as shown on-screen (ready for publication). Data is from transcriptome of Arabidopsis seeds during germination [20]

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