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Table 1 Differentially expressed genes detected in the hybrid broccoli and their parents

From: Transcriptome and DNA methylome reveal insights into yield heterosis in the curds of broccoli (Brassica oleracea L var. italic)

Hybrid set

DGPP or DGHP

Samples

Up

Down

B2P

Total

NKR-04 x NKR-05

P04 vs. P05

425 (53.3%)

373 (46.7%)

 

798

F06 vs. P04

460 (80.6%)

111(19.4%)

 

571

F06 vs. P05

388 (80.8%)

92 (19.1%)

 

480

F06 vs. (P04 and P05)

79 (68.7%)

26 (22.6%)

10 (8.7%)

115

Bro-10 x Bro-11

P10 vs. P11

472 (52.7%)

424 (47.3%)

 

896

F12 vs. P10

418 (73.6%)

150 (26.4%)

 

568

F12 vs. P11

416 (80.5%)

101(19.5%)

 

517

F12 vs. (P10 and P11)

123 (80.4%)

22 (14.4%)

8 (5.2%)

153

  1. Notice: DGPP indicated the differentially expressed genes, (DEGs) between two parents, DGHP indicated the DEGs between the hybrid and their parents, B2P indicated the expression levels of the DEGs between the two parental lines. P04, P05, F06, P10, P11 and P12 indicated NKR-04, NKR-05, NKR-06, Bro-10, Bro-11 and Bro-12, respectively
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BMC Plant Biology

ISSN: 1471-2229

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