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Table 2 A list of intrastrand deletion events (IDEs) in the Paspalum lineage

From: Investigation of mitochondrial-derived plastome sequences in the Paspalum lineage (Panicoideae; Poaceae)

IDE

Sequence

Deletion Length (bp)

Divergence Time (Ma)

Paspalum with Deletion

Both repeats present at each end of the deletion

One repeat present at one end of the deletion

A

CAAATATTCGGA

17,929

2.4

P. dilatatum

P. pubiflorum, P. virgatum, P. simplex

P. juergensii, P. fimbriatum, P. minus, P. ionanthum, P. glaziovii, P. inaequivalve, P. vaginatum

B

ATATAACTTCCC

10,466

3.3

P. simplex

P. pubiflorum

P. juergensii, P. fimbriatum, P. virgatum, P. minus, P. ionanthum

C

TCCTGAAACGTAAAAAA

220

3.3

P. simplex

P. dilatatum, P. pubiflorum, P. virgatum

 

D

ACTTGCTC

11,340

6.2

P. virgatum

P. pubiflorum

P. juergensii, P. fimbriatum, P. simplex, P. minus, P. ionanthum

E

ATGATTTGG

18,645

1.4

P. juergensii

P. pubiflorum

P. fimbriatum, P. dilatatum, P. virgatum, P. simplex, P. minus, P. ionanthum, P. glaziovii, P. inaequivalve, P. vaginatum

F

GGAATCCGTTAGAAAT

17,700

2.0

P. glaziovii, P. inaequivalve, P. vaginatum

 

P. dilatatum, P. juergensii, P. fimbriatum, P. pubiflorum, P. virgatum, P. simplex, P. minus, P. ionanthum,

G

GGCTCGGCGAC

112

4.8

P. ionanthum

P. pubiflorum, P. virgatum, P. minus

P. simplex