Comparative root transcriptome of wild Arachis reveals NBS-LRR genes related to nematode resistance

BMC Plant Biology

Table 1 Statistics of Arachis spp. reads mapped onto the A. duranensis reference genome and analysis of the differentially expressed genes (DEGs) under RKN infection against the control

Library^a	Number of mapped genes	% of mapped reads	Number of mapped genes	% of mapped reads	Number of _LDEG (FDR < 0.05)	Number of DEG (FDR < 0.05) (Log2FC >2 or < -2)
Library^a	Replicate 1		Replicate 2		Number of _LDEG (FDR < 0.05)	Number of DEG (FDR < 0.05) (Log2FC >2 or < -2)
DCTR	25,096	97.58	25,023	97.82	N/A	N/A
DN3	25,338	97.42	25,389	97.95	2,078	124
DN6	25,466	98.01	24,999	97.97	791	61
DN9	24,969	97.83	24,564	97.76	685	46
SCTR	22,914	96.39	22,375	96.89	N/A	N/A
SN3	21,602	95.4	22,237	96.37	472	79
SN6	21,337	94.81	21,914	95.88	2,314	472
SN9	22,193	96.39	21,615	96.31	479	128

^a Different time points after M. arenaria inoculation in A. duranensis DCTR – control; DN3 – 3 DAI; DN6 – 6 DAI; DN9 – 9 DAI; and A. stenosperma SCTR – control; SN3 – 3 DAI; SN6 – 6 DAI; SN9 9 DAI. N/A – Not Applied

ISSN: 1471-2229