Table 1 Summary of average read count from sequencing of three mapping populations (49-plex libraries) using genotyping-by-sequencing method
RIL Population | Average number of reads/RIL (millions) | |||
|---|---|---|---|---|
Read count | Reads surviving after trimming | No. of unique reads | Total No. of reads mapped to draft genome | |
PR-2 (Orb x CDC Striker) | 4.6 | 4.02 | 1.15 (28.7%) | 3.24 (80.8%) |
PR-7 (Carerra x CDC Striker) | 4.0 | 3.15 | 1.08 (34.3%) | 2.42 (76.8%) |
PR-15 (1–2347-144 x CDC Meadow) | 3.9 | 3.19 | 1.19 (37.3%) | 2.48 (77.8%) |