Table 3 QTL information for plant height and technical length in two populations

 uq.C1–1

1

28.51

Lu1_695389

3.71

1.57

12.76

27.5

30.5

TL

Yuanmou

Lus10012562,Lus10016188

Unknown function; COBRA-like protein

 uq.C4–1

4

24.41

Lu4_300701

3.07

2.28

25.7

24.1

24.4

PH

Langfang

Lus10041481

Multicopper oxidase

 uq.C5–1

5

52.51

Lu5_8504

3.89

1.95

25.31

52.2

53.3

PH,TL

Langfang, Jingtai

Lus10007137

large subunit ribosomal protein L13Ae

 uq.C6–1

6

19.81

Lu6_639236

3.63

1.79–2.03

16.21–22.47

17.8

24

PH,TL

Yuanmou

Lus10034082,Lus10017587, Lus10019435

Proline-rich receptor-like protein kinase perk; carboxylesterase 17-related;oxidoreductase

 uq.C8–1

8

10.11

Lu8_646184

3.62

1.25

8.16

9.6

10.4

TL

Jingtai

Lus10011957

nucleosome assembly protein 1-like 1

 uq.C8–2

8

81.21

Lu8_185009

5.09

−2.16

19.08

80.6

82.1

PH,TL

Jingtai

 uq.C8–3

8

93.41

Lu8_119488

3.14

−1.97

25.98

92.2

96.5

PH

Langfang

Lus10012249,Lus10012252

fanconi anemia group J protein;high mobility group protein 2-related

 uq.C11–1

11

46.91

Lu11_557617

3.3

−1.88

22.19

46.6

47.7

PH

Langfang

Lus10038920

monocopper oxidase-like protein sks1-related

 uq.C12–1

12

34.31

Lu12_696508

2.7–4.8

−4.53

18.71–23.54

2.8

36.7

PH,TL

Langfang, Lanzhou, Yuanmou

Lus10036228,Lus10036227,Lus10036229, Lus10036247,Lus10023392

Ribosomal protein L7/L12-related; UDP-N-acetylglucosamine pyrophosphorylase; choline-phosphate cytidylyltransferase; F21O3.9 Protein-related;protein LSD1

 uq.C14–1

14

32.61

Lu14_231853

3.94–7.26

2.56–3.08

20.62–26.94

32

33.1

PH, TL

Langfang,Lanzhou, Yuanmou

Lus10015608,Lus10015614

MYB domain protein 26; insoluble isoenzyme cwinv1-related

 uq.C1–1

1

17.61

Lu1_396428

3.79

−1.84

21.11

16.2

17.9

PH

Langfang

Lus10027782,Lus10016188, Lus10027887

Laccase-10-related;COBRA-related protein 6; Wax ester synthase-like Acyl-CoA acyltransferase domain; Wax ester synthase-like Acyl-CoA acyltransferase domain

 uq.C2–2

2

96.71

Lu2_597057

6.79

1.77

10.29

94.6

97.9

TL

Jingtai

Lus10014561,Lus10014535, Lus10030692

glycosylphosphatidylinositol transamidase; Formate dehydrogenase

 uq.C3–1

3

23.41

Lu3_693423

4.05

−2.42

20.53

20.9

24.2

PH

Lanzhou

 uq.C7–1

7

12.31

Lu7_781312

3.04

3.67

73.41

5.8

15.7

TL

Yuanmou

 uq.C9–1

9

41.41

Lu9_503128

6.43

2.68

21.83

40.9

46.4

PH

Yuanmou, Langfang

Lus10002031,Lus10015623

Unknown function; fatty acid omega-hydroxy dehydrogenase

 uq.C9–2

9

56.21

Lu9_618122

3.43

1.22

10.53

51.9

58.7

TL

Jingtai

 uq.C11–1

11

37.41

Lu11_447048

4.54

−2.32

22.91

36.9

38

PH

Langfang

Lus10038920

monocopper oxidase-like protein sks1-related

 uq.C12–1

12

2.01

Lu12_163596

3.44

−2.23

21.84

0

3.6

PH

Lanzhou

Lus10031416

Nicotianamine synthase

 uq.C13–1

13

54.91

Lu13_367183

3.34

3.21

68.2

53.8

56.7

PH

Yuanmou

Lus10026439,Lus10026441

Threonine-specific protein kinase; peptidyl-prolyl cis-trans isomerase SDCCAG10