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Table 3 Auxin Signaling (corresponding to Fig. 5d)

From: Auxin controls circadian flower opening and closure in the waterlily

Heat Map Number

Cluster Number

Gene ID

Best homolog

FPKM (6:00)

FPKM (7:00)

FPKM (10:00)

FPKM (14:00)

FPKM (18:00)

16

Cluster 7

DN39076_c0_g1

TIR1

4.7

3.4

4.6

6.1

5.8

Cluster 8

DN44053_c0_g1

TIR1

191.3

204.0

210.0

231.2

258.3

Cluster 5

DN29985_c1_g2

TIR1

56.9

63.2

79.1

79.5

82.7

17

Cluster 5

DN44053_c0_g2

AFB2

39.5

43.3

52.4

53.7

51.8

18

Cluster 1

DN38861_c2_g1

IAA3

291.8

268.6

305.7

161.5

99.0

Cluster 2

DN43322_c1_g2

IAA17

120.4

91.4

47.9

26.1

35.8

Cluster 2

DN29291_c6_g2

IAA16

1378.1

1155.9

966.0

1013.8

880.1

Cluster 3

DN36526_c1_g1

IAA14

97.8

64.2

142.4

98.5

21.4

Cluster 3

DN41135_c1_g1

IAA31

16.7

11.7

49.2

12.8

2.1

Cluster 3

DN39405_c0_g2

IAA3

426.1

332.4

654.6

537.9

263.5

Cluster 3

DN36526_c2_g1

IAA30

750.4

511.0

817.6

784.3

293.3

Cluster 3

DN42150_c0_g1

IAA26

13.5

9.4

18.7

11.7

4.0

Cluster 3

DN36178_c2_g1

IAA13

7.9

7.9

19.2

8.6

3.6

Cluster 4

DN40289_c0_g1

IAA26

4.6

3.8

2.6

5.4

6.9

Cluster 4

DN33854_c1_g1

IAA25

42.3

30.2

11.2

33.5

97.7

Cluster 5

DN41517_c0_g2

IAA8

507.9

417.5

523.9

579.1

482.1

Cluster 5

DN35116_c0_g1

IAA11

12.9

8.3

31.5

41.5

10.6

Cluster 5

DN41517_c0_g1

IAA9

711.7

611.9

763.7

808.9

683.0

Cluster 5

DN43354_c0_g3

IAA8

300.1

293.1

350.9

386.0

265.8

Cluster 6

DN39204_c2_g2

IAA33

27.3

28.7

13.3

26.8

23.5

Cluster 8

DN40289_c0_g2

IAA7

43.0

47.3

10.9

44.2

186.9

19

Cluster 1

DN42573_c1_g3

ARF7

71.6

88.3

74.2

37.4

59.6

Cluster 1

DN47912_c2_g2

ARF19

59.4

89.5

74.8

32.9

58.0

Cluster 1

DN47912_c2_g1

ARF16

62.8

95.2

84.0

37.5

60.5

Cluster 2

DN39252_c1_g1

ARF7

17.4

17.4

13.1

12.5

15.1

Cluster 3

DN47227_c3_g1

ARF5

46.9

57.7

120.2

83.1

29.5

Cluster 3

DN47227_c4_g1

ARF5

60.3

72.7

139.3

100.4

36.3

Cluster 4

DN37116_c1_g1

ARF2

33.6

32.5

27.9

39.0

40.5

Cluster 6

DN37212_c0_g1

ARF8

227.3

298.4

232.6

199.7

322.0

Cluster 6

DN41045_c0_g1

ARF2

14.6

17.3

12.3

13.2

19.4

Cluster 8

DN44980_c1_g1

ARF18

7.0

7.1

6.6

8.8

12.4

Cluster 8

DN40890_c1_g1

ARF5

0.5

0.6

0.6

1.1

1.6

20

Cluster 7

DN46701_c1_g3

TOPLESS1

14.8

15.9

19.4

30.0

28.3

Cluster 7

DN47270_c1_g1

TOPLESS1

9.1

9.5

11.1

16.7

18.4

21

Cluster 1

DN34356_c1_g2

SAUR72

2.2

3.9

1.9

0.3

0.7

Cluster 1

DN26029_c0_g1

SAUR36

36.2

33.2

39.4

21.0

8.5

Cluster 1

DN30854_c2_g2

SAUR32

47.9

39.1

51.6

21.9

18.5

Cluster 2

DN30854_c1_g1

SAUR36

67.4

67.9

24.8

16.1

36.8

Cluster 3

DN41900_c0_g1

SAUR50

102.4

115.7

350.6

153.2

47.3

Cluster 3

DN34089_c0_g2

SAUR64

5.1

4.6

25.9

10.2

1.6

Cluster 3

DN35232_c0_g1

SAUR50

7.5

4.5

15.4

12.4

2.9

Cluster 3

DN39216_c0_g2

SAUR66

3.3

2.1

22.8

8.6

1.5

Cluster 3

DN42996_c6_g1

SAUR50

19.3

19.9

65.7

14.6

5.7

Cluster 3

DN35909_c3_g1

SAUR50

65.9

51.3

186.8

81.6

30.3

Cluster 3

DN34089_c0_g1

SAUR61

122.2

79.7

544.6

183.8

22.4

Cluster 3

DN43134_c0_g1

SAUR36

455.9

334.9

2128.9

771.6

85.5

Cluster 3

DN39216_c0_g4

SAUR62

10.7

5.8

70.1

28.0

2.3

Cluster 3

DN47793_c0_g1

SAUR32

12.7

10.8

15.2

9.8

4.8

Cluster 3

DN43134_c0_g2

SAUR36

6.8

8.0

46.2

15.1

2.3

Cluster 3

DN41900_c0_g3

SAUR50

32.7

49.0

113.0

50.7

17.5

Cluster 3

DN41900_c0_g2

SAUR50

68.8

74.2

236.7

52.8

17.3

Cluster 5

DN25157_c0_g1

SAUR36

4.6

2.4

12.4

11.0

4.2

Cluster 6

DN42146_c2_g1

SAUR71

47.4

61.2

9.8

15.6

50.9

Cluster 7

DN26029_c1_g1

SAUR36

8.1

5.8

4.7

28.6

31.9

Cluster 8

DN26314_c0_g1

SAUR36

2.5

3.1

3.3

22.5

34.0

Cluster 8

DN27201_c0_g2

SAUR36

2.4

1.8

0.6

5.2

15.1

Cluster 8

DN37811_c0_g1

SAUR71

0.8

0.4

0.2

2.9

5.1

Cluster 8

DN26420_c0_g1

SAUR32

4.6

2.8

2.0

62.0

103.7

Cluster 8

DN29435_c1_g1

SAUR32

1.3

0.7

0.9

8.3

17.1

  1. Transcriptome profile of auxin signaling-regulators, corresponding to Fig. 5d