Temporal transcriptome profiling of developing seeds reveals a concerted gene regulation in relation to oil accumulation in Pongamia (Millettia pinnata)

Table 2 Statistics of sequencing reads of Pongamia seeds

Statistical items	MpSI (10 WAF)			MpSII (20 WAF)			MpSIII (30 WAF)
Statistical items	Bio Rep 1	Bio Rep 2	Bio Rep 3	Bio Rep 1	Bio Rep 2	Bio Rep 3	Bio Rep 1	Bio Rep 2	Bio Rep 3
Number of raw reads	11,647,185	12,257,699	12,260,134	12,228,128	12,048,853	12,158,946	12,193,835	11,642,139	11,733,151
Number of clean reads	11,454,727	12,040,521	12,032,882	12,092,059	11,887,431	11,974,117	12,015,668	11,478,732	11,558,271
Number of unique mapped reads	7,637,721	7,715,097	7,558,678	7,701,924	6,293,438	6,457,506	7,523,962	7,295,324	7,335,598
Number of multiple mapped reads	2,878,476	3,249,060	3,444,234	3,673,346	4,977,765	4,834,533	3,604,042	3,297,949	3,396,170
Number of mapped reads	10,516,197	10,964,157	11,002,912	11,375,270	11,271,203	11,292,039	11,128,004	10,593,273	10,731,768
Mapping ratio	91.81%	91.06%	91.44%	94.07%	94.82%	94.30%	92.61%	92.29%	92.85%

ISSN: 1471-2229