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Table 2 Statistics of sequencing reads of Pongamia seeds

From: Temporal transcriptome profiling of developing seeds reveals a concerted gene regulation in relation to oil accumulation in Pongamia (Millettia pinnata)

Statistical items MpSI (10 WAF) MpSII (20 WAF) MpSIII (30 WAF)
Bio Rep 1 Bio Rep 2 Bio Rep 3 Bio Rep 1 Bio Rep 2 Bio Rep 3 Bio Rep 1 Bio Rep 2 Bio Rep 3
Number of raw reads 11,647,185 12,257,699 12,260,134 12,228,128 12,048,853 12,158,946 12,193,835 11,642,139 11,733,151
Number of clean reads 11,454,727 12,040,521 12,032,882 12,092,059 11,887,431 11,974,117 12,015,668 11,478,732 11,558,271
Number of unique mapped reads 7,637,721 7,715,097 7,558,678 7,701,924 6,293,438 6,457,506 7,523,962 7,295,324 7,335,598
Number of multiple mapped reads 2,878,476 3,249,060 3,444,234 3,673,346 4,977,765 4,834,533 3,604,042 3,297,949 3,396,170
Number of mapped reads 10,516,197 10,964,157 11,002,912 11,375,270 11,271,203 11,292,039 11,128,004 10,593,273 10,731,768
Mapping ratio 91.81% 91.06% 91.44% 94.07% 94.82% 94.30% 92.61% 92.29% 92.85%