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Table 2 Mutation sites in chlorophyll-deficient mutant (cdm) and wild-type (WT) compared with the reference genome

From: A missense mutation of plastid RPS4 is associated with chlorophyll deficiency in Chinese cabbage (Brassica campestris ssp. pekinensis)

Location in Ref genome Region Mutation type Reference FT cdm
265 trnH-psbA spacer SNP A T T
266 trnH-psbA spacer SNP A T T
267 trnH-psbA spacer SNP A T T
268 trnH-psbA spacer SNP A T T
20,164 rpoC1 coding region SNP C T T
44,398 rps4 coding region SNP A A C
66,083 psaJ-rpl33 spacer SNP A T T
66,084 psaJ-rpl33 spacer SNP G T T
66,085 psaJ-rpl33 spacer SNP A C C
66,086 psaJ-rpl33 spacer SNP A T T
116,457 psaC coding region SNP G A A