Table 1 Proteins showing significant changes in responses to WS in the 101.14 genotype
n. | Name (f.c.) | Accession | Δ:WS/C |
|---|---|---|---|
Carbon and energy metabolism (1, 2, 3, 4, 5, 6, 7, 8, 9, 25) | |||
 97 | unnamed protein product - sucrose synthase 2-like (2) | CBI35298.3 | new |
 397 | fumarate hydratase 1, mitochondrial (8) | XP_002273033.1 | new |
 595 | alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like (2) | XP_002279075.2 | 39.40 |
 559 | aldehyde dehydrogenase family 7 member A1 (5, 8, 20) | XP_002278093.1 | 6.14 |
 938 | ATP-citrate synthase alpha chain protein 2 isoform 2 (8) | XP_003633614.1 | 5.55 |
 222 | glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (7) | XP_002266527.1 | 3.56 |
 368 | sucrose synthase 2 (2) | XP_002271896.1 | 2.86 |
 818 | 1,4-alpha-glucan-branching enzyme-like (2) | XP_002284841.2 | 2.43 |
 443 | triosephosphate isomerase, chloroplastic-like isoform 1 (1) | XP_002274871.1 | −2.12 |
 432 | enolase 1, chloroplastic-like (4) | XP_002274334.1 | −2.18 |
 269 | fructokinase-2 (2) | XP_002268097.1 | −2.38 |
 158 | pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like isoform 1 (8) | XP_002264210.1 | −2.53 |
 350 | dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like isoform 1 (8) | XP_002271286.1 | −2.94 |
 698 | dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like (8, 11) | XP_002282287.1 | −3.24 |
 307 | pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like (4) | XP_002269934.2 | −3.40 |
 622 | pyruvate kinase isozyme A, chloroplastic isoform 1 (4, 11) | XP_002279975.1 | −3.71 |
 507 | dihydrolipoyl dehydrogenase (8, 11, 21) | XP_002276853.1 | −4.56 |
 301 | pyruvate dehydrogenase E1 component subunit beta (1, 8, 11) | XP_002269441.1 | −8.46 |
 236 | glucose-6-phosphate 1-dehydrogenase, chloroplastic (7, 30) | XP_002266930.1 | −25.91 |
 280 | succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial (8, 29) | XP_002268523.1 | d. |
 551 | carbonic anhydrase, chloroplastic (8, 16) | XP_002277957.1 | d. |
Cell Wall (10) | |||
 273 | UDP-glucose 4-epimerase GEPI48 (10) | XP_002268294.2 | 4.34 |
 282 | beta-xylosidase/alpha-L-arabinofuranosidase 2-like (10, 33) | XP_002268626.2 | −2.68 |
 620 | probable UDP-arabinopyranose mutase 5 (10) | XP_002279911.1 | −2.27 |
 423 | probable xyloglucan endotransglucosylase/hydrolase protein 30-like (10) | XP_002273975.1 | −3.28 |
 702 | probable rhamnose biosynthetic enzyme 1 (10) | XP_002282339.1 | −5.93 |
Lipid Metabolism (11) | |||
 248 | long chain acyl-CoA synthetase 8 (11) | XP_002267417.1 | new |
 312 | glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a (11) | XP_002270067.1 | 50.99 |
 271 | phospholipase D alpha 1 (11, 27) | XP_002268195.1 | 2.46 |
 564 | biotin carboxyl carrier protein of acetyl-CoA carboxylase-like (11) | XP_002278151.2 | −2.86 |
 183 | 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like (11) | XP_002265207.1 | −3.09 |
 942 | phospholipase C 4-like isoform 2 (11) | XP_003633883.1 | −3.12 |
 219 | biotin carboxylase 1, chloroplastic-like (11) | XP_002266489.1 | −3.58 |
 268 | 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic (11, 26) | XP_002268080.1 | −3.71 |
 775 | acyl-CoA-binding domain-containing protein 4-like isoform 1 (11) | XP_002284019.1 | −4.32 |
 958 | flavoprotein wrbA isoform 2 (11) | XP_003634692.1 | d. |
N and amino acid metabolism (12, 13) | |||
 3 | S-adenosylmethionine synthase 2 (13, 15) | A7NVX9.1 | −2.13 |
 929 | glyoxylate reductase isoform 2 (1, 13, 26) | XP_003632860.1 | −2.34 |
 971 | phosphoserine aminotransferase, chloroplastic-like (13, 27) | XP_003635669.1 | −2.36 |
 843 | ferredoxin--nitrite reductase, chloroplastic (12) | XP_002285208.1 | −2.65 |
 518 | serine hydroxymethyltransferase, mitochondrial (1, 13, 25) | XP_002277146.1 | −2.92 |
 318 | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (13) | XP_002270188.1 | −4.84 |
 206 | adenosylhomocysteinase isoform 1 (13) | XP_002266154.1 | −5.43 |
 321 | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like (13) | XP_002270232.1 | −6.15 |
 212 | probable S-adenosylmethionine-dependent methyltransferase At5g37990-like (13, 17) | XP_002266288.2 | −7.51 |
 342 | methionine S-methyltransferase-like (13) | XP_002270977.1 | −10.04 |
 687 | ornithine carbamoyltransferase, chloroplastic (13) | XP_002281919.1 | −10.33 |
 186 | alanine aminotransferase 2 (13) | XP_002265294.2 | −10.94 |
Secondary metabolism (16) | |||
 576 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like (16) | XP_002278406.1 | new |
 392 | aldo-keto reductase family 4 member C9-like (3, 16) | XP_002272909.1 | −2.10 |
 136 | 3-isopropylmalate dehydratase small subunit (16) | XP_002263405.1 | −2.26 |
 549 | isopentenyl-diphosphate Delta-isomerase I-like (16) | XP_002277935.1 | −2.59 |
 717 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic (16) | XP_002282761.1 | −2.76 |
 836 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (16) | XP_002285130.1 | −3.06 |
 960 | bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like (16, 26, 29) | XP_003634871.1 | −6.69 |
 106 | chalcone--flavonone isomerase 1 (16, 27) | P51117.1 | d. |
 373 | protein SRG1 (16) | XP_002272119.1 | d. |
 525 | zeta-carotene desaturase, chloroplastic/chromoplastic (16) | XP_002277348.2 | d. |
 557 | REF/SRPP-like protein At1g67360-like (16) | XP_002278036.1 | d. |
 584 | carotenoid 9,10(9′,10′)-cleavage dioxygenase 1-like (16, 17) | XP_002278628.1 | d. |
Hormone metabolism (17) | |||
 617 | auxin-repressed 12.5 kDa protein isoform 1 (17, 27, 33) | XP_002279836.1 | new |
 591 | auxin-induced protein PCNT115 isoform 1 (17, 26) | XP_002278850.1 | 2.93 |
 148 | linoleate 13S-lipoxygenase 2–1, chloroplastic (17) | XP_002263854.1 | 2.55 |
 457 | HVA22-like protein a (17) | XP_002275428.1 | 2.29 |
 828 | gibberellin 20 oxidase 3-like (16, 17, 26) | XP_002284983.1 | −2.15 |
 767 | probable indole-3-acetic acid-amido synthetase GH3.1 (17) | XP_002283886.1 | −2.23 |
 825 | gibberellin 20 oxidase 3 (16, 17, 26) | XP_002284968.1 | −7.11 |
 54 | hypothetical protein VITISV_007808 (gibberellin 3-beta-dioxygenase 1) (17, 26) | CAN66061.1 | −14.90 |
 897 | 1-aminocyclopropane-1-carboxylate oxidase 5 (17) | XP_002285881.1 | d. |
Stress (20) | |||
 132 | 22.0 kDa heat shock protein (20) | XP_002263376.1 | new |
 436 | auxin-binding protein ABP19a-like (20) | XP_002274457.1 | new |
 513 | putative germin-like protein 2–1 (12, 20, 27, 30, 34) | XP_002277055.1 | new |
 636 | 18.2 kDa class I heat shock protein (20, 29) | XP_002280353.1 | new |
 900 | MLP-like protein 28-like (20) | XP_003631204.1 | new |
 652 | 18.2 kDa class I heat shock protein (20, 29) | XP_002280821.1 | 21.56 |
 810 | MLP-like protein 34 (20) | XP_002284578.1 | 2.92 |
 349 | universal stress protein A-like protein (20, 27, 33) | XP_002271154.1 | 2.14 |
 152 | stress-related protein-like (16) | XP_002263944.1 | 2.12 |
 798 | germin-like protein subfamily 1 member 17 (12, 20, 27, 34) | XP_002284436.1 | −2.50 |
 677 | chitinase 2 (20, 21) | XP_002281729.1 | −3.28 |
 566 | germin-like protein 9–3 (15, 20) | XP_002278170.1 | −4.10 |
 44 | hypothetical protein VITISV_005677 (germin-like protein 9–3) (15, 20) | CAN61171.1 | −14.62 |
 64 | hypothetical protein VITISV_005471 (germin-like protein 1) (12, 20, 27, 34) | CAN71140.1 | d. |
 237 | putative germin-like protein 2–1 (12, 20, 27, 30, 34) | XP_002266984.1 | d. |
 240 | putative germin-like protein 2–1 (12, 20, 27, 30, 34) | XP_002267172.1 | d. |
 867 | pathogen-related protein (20) | XP_002285489.1 | d. |
Redox (21) | |||
 205 | glutathione S-transferase DHAR3, chloroplastic (21) | XP_002266106.1 | new |
 482 | glutaredoxin (21) | XP_002276266.1 | 3.29 |
 754 | peroxiredoxin-2E, chloroplastic (21) | XP_002283652.1 | −2.01 |
 334 | catalase isozyme 1 isoform 1 (21) | XP_002270703.2 | −3.41 |
Miscellaneous enzyme families (26) | |||
 845 | probable glutathione S-transferase (26, 28, 33) | XP_002285214.1 | new |
 36 | hypothetical protein VITISV_041925 - carboxymethylenebutenolidase (26) | CAN60148.1 | 2.41 |
 633 | peroxidase 3 (20, 26) | XP_002280274.1 | 2.27 |
 23 | glutathione S-transferase 5 (11, 16, 26) | ABW34390.1 | 2.11 |
 445 | (+)-neomenthol dehydrogenase-like isoform 2 (26) | XP_002274970.2 | −2.01 |
 396 | minor allergen Alt a 7-like (11, 26, 27) | XP_002273030.1 | −2.16 |
 427 | probable inactive purple acid phosphatase 1-like (26, 27) | XP_002274118.2 | −2.29 |
 338 | epoxide hydrolase 2 (26) | XP_002270883.2 | −2.29 |
 286 | probable glutathione S-transferase (26) | XP_002268911.1 | −2.45 |
 840 | NADP-dependent alkenal double bond reductase P1 (26, 34) | XP_002285167.1 | −47.43 |
DNA/RNA (27, 28) | |||
 281 | proactivator polypeptide-like 1 isoform 1 (28) | XP_002268581.1 | new |
 623 | ribonuclease 3 (27) | XP_002280078.1 | new |
 755 | putative DNA repair protein RAD23–3 isoform 1 (28, 29) | XP_002283656.1 | −2.49 |
 164 | KH domain-containing protein At4g18375 isoform 1 (27) | XP_002264417.1 | −5.48 |
Protein (29) | |||
 99 | unnamed protein product (pseudouridine synthase) (29) | CBI39540.3 | new |
 759 | outer envelope pore protein 16, chloroplastic (29) | XP_002283749.1 | new |
 803 | eukaryotic translation initiation factor 3 subunit E (29) | XP_002284533.1 | new |
 829 | vesicle-fusing ATPase-like (29) | XP_002284987.1 | new |
 252 | protease Do-like 1, chloroplastic-like (29) | XP_002267510.2 | 7.32 |
 154 | aspartic proteinase nepenthesin-1 (27, 29) | XP_002263964.1 | 4.86 |
 924 | 40S ribosomal protein S15a-like isoform 2 (29) | XP_003632608.1 | 4.08 |
 794 | N-carbamoyl-L-amino acid hydrolase-like (29) | XP_002284376.1 | 3.95 |
 196 | 26S proteasome non-ATPase regulatory subunit 1-like (29) | XP_002265758.2 | 2.39 |
 279 | serine carboxypeptidase-like 18 (29) | XP_002268517.1 | −2.00 |
 774 | acylamino-acid-releasing enzyme-like isoform 1 (29) | XP_002284013.2 | −2.25 |
 768 | aspartic proteinase nepenthesin-1-like (27, 29) | XP_002283889.2 | −2.31 |
 641 | uncharacterized protein LOC100259133 (m.: 29, 33) | XP_002280454.1 | −2.58 |
 50 | hypothetical protein VITISV_017087 (serine carboxypeptidase II-3-like) (29) | CAN63486.1 | −2.86 |
 651 | pyrrolidone-carboxylate peptidase isoform 4 (29) | XP_002280794.1 | −2.92 |
 722 | protein transport protein Sec24-like At3g07100-like (29) | XP_002282857.1 | −3.18 |
 701 | serine carboxypeptidase II-3-like (29) | XP_002282331.1 | −3.30 |
 65 | hypothetical protein VITISV_003230 (m.: 29) | CAN71580.1 | −3.78 |
 679 | cucumisin-like (29) | XP_002281790.2 | −4.22 |
 522 | cucumisin-like (29) | XP_002277242.2 | −5.96 |
 689 | serine carboxypeptidase II-3-like (29) | XP_002281988.1 | −6.70 |
 311 | probable serine/threonine-protein kinase At5g41260 (29) | XP_002270065.1 | −12.57 |
 720 | serine carboxypeptidase-like 45-like (29) | XP_002282852.1 | −15.26 |
 58 | hypothetical protein VITISV_026357 (m.: 29, 30, 33) | CAN68006.1 | −51.68 |
 470 | cucumisin-like (29) | XP_002275807.1 | −106.41 |
 303 | uncharacterized protein LOC100254416 (pathogenesis-related protein 17) (29) | XP_002269470.1 | d. |
 721 | subtilisin-like protease-like (29, 30) | XP_002282856.1 | d. |
Cell /Â signaling / development (30, 31, 33) | |||
 140 | 70 kDa peptidyl-prolyl isomerase (29, 31) | XP_002263566.2 | new |
 357 | actin-depolymerizing factor 10 (31) | XP_002271495.1 | new |
 744 | transmembrane emp24 domain-containing protein A (31) | XP_002283487.1 | new |
 163 | uncharacterized protein LOC100255239 (calcium ion binding protein) (30) | XP_002264359.1 | 5.11 |
 799 | glutelin type-A 1 (28, 33) | XP_002284459.1 | 4.50 |
 415 | calnexin homolog 1 (30) | XP_002273708.1 | 4.47 |
 644 | uncharacterized protein LOC100266227 (Late embryogenesis abundant protein Lea14-A) (33) | XP_002280489.1 | 4.09 |
 934 | VAMP-like protein YKT61-like (31) | XP_003633163.1 | 3.26 |
 740 | oxysterol-binding protein-related protein 3C (31) | XP_002283434.1 | −2.07 |
 676 | uncharacterized protein HI_0488 (phosphatase YqaB) (33) | XP_002281714.1 | −2.18 |
 332 | coatomer subunit epsilon-1 isoform 1 (31) | XP_002270662.1 | −2.35 |
 599 | nitrogen regulatory protein P-II homolog (30) | XP_002279289.1 | −2.60 |
 907 | uncharacterized protein LOC100854676 (m.: 30) | XP_003631533.1 | −3.20 |
 735 | DAG protein, chloroplastic isoform 1 (33) | XP_002283211.1 | −3.83 |
 245 | tubulin beta-1 chain isoform 1 (31) | XP_002267304.1 | −4.10 |
 374 | golgin candidate 6-like (29, 31) | XP_002272168.1 | −4.22 |
 560 | PRA1 family protein B4-like (30, 31) | XP_002278095.1 | d. |
Transport (34) | |||
 704 | pyrophosphate-energized vacuolar membrane proton pump 1 (34) | XP_002282358.1 | 2.76 |
 870 | uncharacterized protein LOC100240897 (m.: 34) | XP_002285517.1 | 2.29 |
 548 | aquaporin TIP2–3 (34) | XP_002277904.2 | −5.27 |
Others (15, 18, 23, 24) | |||
 86 | unnamed protein product (DJ-1 family protein) (18) | CBI20205.3 | new |
 516 | ferritin-3, chloroplastic (15) | XP_002277114.1 | 6.49 |
 731 | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (23) | XP_002283095.1 | 5.41 |
 700 | ectonucleotide pyrophosphatase/phosphodiesterase family member 3 (23) | XP_002282308.1 | 4.52 |
 95 | unnamed protein product (nucleoside diphosphate kinase) (23) | CBI34488.3 | 3.07 |
 639 | 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic-like (18) | XP_002280427.1 | 2.58 |
 492 | guanine deaminase (23) | XP_002276494.1 | −2.41 |
 123 | nucleoside diphosphate kinase 2, chloroplastic isoform 1 (23) | XP_002263177.1 | −3.31 |
 894 | biotin--protein ligase (18) | XP_002285834.1 | −4.28 |
 535 | probable carboxylesterase 15 (24) | XP_002277507.1 | −7.50 |
 90 | unnamed protein product (soluble inorganic pyrophosphatase) (23) | CBI25065.3 | d. |
 161 | selT-like protein (15) | XP_002264265.1 | d. |
Hypothetical /Â Unknown function (35) | |||
 76 | unknown protein (35) | CAQ58595.1 | new |
 85 | unnamed protein product (Protein tolB) (35) | CBI18981.3 | new |
 230 | protein LURP-one-related 15 (35) | XP_002266795.1 | new |
 902 | probable nucleoredoxin 1-like (35) | XP_003631263.1 | 2.99 |
 127 | uncharacterized protein At5g48480 (35) | XP_002263284.1 | 2.81 |
 387 | pre-mRNA-processing factor 39-like (35) | XP_002272685.1 | −2.36 |
 420 | uncharacterized protein LOC100242710 (35) | XP_002273917.1 | −2.44 |
 361 | putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 isoform 1 (35) | XP_002271535.1 | −3.07 |
 841 | putative clathrin assembly protein At2g25430-like (35) | XP_002285168.1 | −3.35 |
 199 | uncharacterized protein LOC100265424 (35) | XP_002265851.1 | −4.35 |
 232 | uncharacterized protein LOC100253185 (35) | XP_002266892.1 | −4.68 |
 412 | S-norcoclaurine synthase (35) | XP_002273566.1 | −4.92 |
 48 | hypothetical protein VITISV_010154 (35) | CAN62850.1 | −6.76 |
 553 | transmembrane protein 111 (35) | XP_002277989.1 | −7.13 |
 184 | NADPH:quinone oxidoreductase (35) | XP_002265225.1 | −16.72 |
 82 | unnamed protein product (metal ion binding protein, putative) (35) | CBI17463.3 | d. |
 582 | clavaminate synthase-like protein At3g21360 (35) | XP_002278552.1 | d. |
 890 | uncharacterized protein LOC100254028 (35) | XP_002285734.1 | d. |