Genome-wide identification and characterization of InDels and SNPs in Glycine max and Glycine soja for contrasting seed permeability traits

Table 1 Categorization of SNPs and InDels in G. max and G. soja (URR: Upstream regulatory regions, DRR: Downstream regulatory regions, CDS: Coding sequences)

Variations	Type of Variation		Frequency in G. max	Frequency in G. soja
SNPs	Gene Based	URR	11,508	73,384
		DRR	9546	60,406
		CDS	4386	20,831
	Intergenic		925	31,936
	Non-synonymous		380	903
InDels	Gene Based	URR	153,820	265,741
		DRR	133,212	228,455
		CDS	62,335	101,156
	Intergenic		65,090	101,823
	Non-synonymous		1077	2013

ISSN: 1471-2229