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Table 2 Sequences of forward and reverse primers for amplification of apple genes used in the Bisulfite sequencing-PCR analyses

From: The effect of promoter methylation on MdMYB1 expression determines the level of anthocyanin accumulation in skins of two non-red apple cultivars

Primer position

Sense Primer (5′-3′)

Anti-sense Primer (5′-3′)

−2026, − 1870a

GAAATYGTTYGAAGGTYTAAGG

ACARCAAACACCCAAAATCC

−1898, −1633

TGATTAAAGGGATTTTGGGTGTTTG

AAATARAACCRRACCTATCTCA

−1667, −1287

GTTTGTAAYAGAYTGAGATAGGT

TCCAAAACCCCARATTCTTAT

−1312, −1035

TATGYATAAGAATYTGGGGTTTTGGA

CTTACTTRRTCACATTATACCATC

−1062, −964

YAYYGATGGTATAATGTGAYYAAGT

ACATTATTTTCATARRTRRTTCARCC

−989, −774a

GGYTGAAYYAYYTATGAAAATAATG

ARACRCTACACCTAACACATTRCT

−841, −533

TTGTGAAAGYTTAGTGAGTTGAAG

ATTCTCTCCTTTTTTTCCCTCTTCT

−541,-435

GGAGAGAATYYTAYTYYATAAATTAYAAG

CTTTCRCTRCTTTTTCAARTRTT

−434, −188

TTATGGTGGTYAAAGATGTGTGTTGTAA

CAAACACTRACAARTTTAAAACATTCCAACA

−198, −60

GTYAGTGTTTGYTTYTGTGGATATY

TCCARAAARACACCTARCTACC

−51, 106a

AGTGGGTAGYAGGYAAAAGA

TCCACTTTCCCTCTCCATRA

  1. aPrimers modified from Telias et al. [11]. Y = C or T; and R = A or G